Building Synthetic Biosensors Using Red Blood Cell Proteins

IF 3.7 2区 生物学 Q1 BIOCHEMICAL RESEARCH METHODS ACS Synthetic Biology Pub Date : 2024-03-27 DOI:10.1021/acssynbio.3c00754
Taylor B. Dolberg, Taylor F. Gunnels, Te Ling, Kelly A. Sarnese, John D. Crispino and Joshua N. Leonard*, 
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Abstract

As the use of engineered cell therapies expands from pioneering efforts in cancer immunotherapy to other applications, an attractive but less explored approach is the use of engineered red blood cells (RBCs). Compared to other cells, RBCs have a very long circulation time and reside in the blood compartment, so they could be ideally suited for applications as sentinel cells that enable in situ sensing and diagnostics. However, we largely lack tools for converting RBCs into biosensors. A unique challenge is that RBCs remodel their membranes during maturation, shedding many membrane components, suggesting that an RBC-specific approach may be needed. Toward addressing this need, here we develop a biosensing architecture built on RBC membrane proteins that are retained through erythropoiesis. This biosensor employs a mechanism in which extracellular ligand binding is transduced into intracellular reconstitution of a split output protein (including either a fluorophore or an enzyme). By comparatively evaluating a range of biosensor architectures, linker types, scaffold choices, and output signals, we identify biosensor designs and design features that confer substantial ligand-induced signal in vitro. Finally, we demonstrate that erythroid precursor cells engineered with our RBC-protein biosensors function in vivo. This study establishes a foundation for developing RBC-based biosensors that could ultimately address unmet needs including noninvasive monitoring of physiological signals for a range of diagnostic applications.

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利用红细胞蛋白构建合成生物传感器。
随着工程细胞疗法的应用从癌症免疫疗法的开创性工作扩展到其他应用领域,一种有吸引力但探索较少的方法是使用工程红细胞(RBC)。与其他细胞相比,红细胞的循环时间非常长,而且存在于血液中,因此非常适合作为哨兵细胞应用,实现原位传感和诊断。然而,我们在很大程度上缺乏将红细胞转化为生物传感器的工具。一个独特的挑战是,红细胞在成熟过程中会重塑其膜,脱落许多膜成分,这表明可能需要一种针对红细胞的方法。为了满足这一需求,我们在此开发了一种基于红细胞膜蛋白的生物传感结构。这种生物传感器采用的机制是,细胞外配体结合转化为细胞内分裂输出蛋白(包括荧光团或酶)的重组。通过比较评估一系列生物传感器结构、连接体类型、支架选择和输出信号,我们确定了能在体外产生大量配体诱导信号的生物传感器设计和设计特征。最后,我们证明了使用我们的红细胞蛋白生物传感器设计的红细胞前体细胞在体内的功能。这项研究为开发基于 RBC 的生物传感器奠定了基础,这种传感器最终可以满足各种未满足的需求,包括对一系列诊断应用的生理信号进行无创监测。
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来源期刊
CiteScore
8.00
自引率
10.60%
发文量
380
审稿时长
6-12 weeks
期刊介绍: The journal is particularly interested in studies on the design and synthesis of new genetic circuits and gene products; computational methods in the design of systems; and integrative applied approaches to understanding disease and metabolism. Topics may include, but are not limited to: Design and optimization of genetic systems Genetic circuit design and their principles for their organization into programs Computational methods to aid the design of genetic systems Experimental methods to quantify genetic parts, circuits, and metabolic fluxes Genetic parts libraries: their creation, analysis, and ontological representation Protein engineering including computational design Metabolic engineering and cellular manufacturing, including biomass conversion Natural product access, engineering, and production Creative and innovative applications of cellular programming Medical applications, tissue engineering, and the programming of therapeutic cells Minimal cell design and construction Genomics and genome replacement strategies Viral engineering Automated and robotic assembly platforms for synthetic biology DNA synthesis methodologies Metagenomics and synthetic metagenomic analysis Bioinformatics applied to gene discovery, chemoinformatics, and pathway construction Gene optimization Methods for genome-scale measurements of transcription and metabolomics Systems biology and methods to integrate multiple data sources in vitro and cell-free synthetic biology and molecular programming Nucleic acid engineering.
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