Nitidine from Zanthoxylum rhetsa and its cytotoxic activities in vitro and in silico ADMET properties

IF 1.3 Q3 CHEMISTRY, MULTIDISCIPLINARY Vietnam Journal of Chemistry Pub Date : 2024-03-26 DOI:10.1002/vjch.202300278
Tran Thi Tuyen, Pham Minh Quan, D. H. Nghi, Pham Cao Bach, Dang Hoang Hiep, Nguyen Thanh Duong, Nguyen Nhat Linh, Trinh Anh Vien, Phạm Thị Hồng Minh, Nguyen Thi Hong Van
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Abstract

Nitidine, a potential medicinal natural benzophenanthridine alkaloid, has expressed various bioactivities such as antibacterial, antifungal, antiviral, anti‐inflammatory, analgesic, and notably cytotoxicity. In this study, nitidine was isolated from trunk of Zanthoxylum rhetsa (Rutaceae) and its structure was elucidated by spectral data (1D and 2D NMR; and MS). The cytotoxicity of nitidine was assessed in vitro against five cancer cell lines, and normal cell line Vero. As the results, nitidine exhibited potent inhibitory activity against KB, LU‐1, HepG2, LNCaP and MCF7 cell lines with IC50 values of 0.28, 0.26, 0.27, 0.25 and 0.28 µm, respectively, while low‐cytotoxicity against normal cell line Vero with IC50 value of 140.65 µm. Comparing cytotoxic activity of nitidine with docking analysis in previous study, nitidine formed hydrogen bonds with residues Asn101 and Ala317 of tubulin and had a docking score of −14.45 kcal/mol, all the data proved nitidine would be a potential candidate for inhibiting the function of tubulin at the active site regarding binding affinity, dock pose, and ADMET—where ADMET stands for absorption, distribution, metabolism, excretion and toxicity—properties analysis.
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来自 Zanthoxylum rhetsa 的氮苷及其体外细胞毒性活性和硅学 ADMET 特性
硝啶是一种潜在的药用天然二苯并菲啶类生物碱,具有多种生物活性,如抗菌、抗真菌、抗病毒、消炎、镇痛和显著的细胞毒性。本研究从芸香科植物 Zanthoxylum rhetsa 的树干中分离出了硝啶,并通过光谱数据(1D 和 2D NMR 以及 MS)阐明了其结构。在体外评估了硝啶对五种癌细胞株和正常细胞株 Vero 的细胞毒性。结果显示,硝啶对 KB、LU-1、HepG2、LNCaP 和 MCF7 细胞株具有强效抑制活性,IC50 值分别为 0.28、0.26、0.27、0.25 和 0.28 µm,而对正常细胞株 Vero 的毒性较低,IC50 值为 140.65 µm。将硝啶的细胞毒性活性与之前研究中的对接分析进行比较,发现硝啶与小管蛋白的残基 Asn101 和 Ala317 形成氢键,对接得分为 -14.45 kcal/mol,所有数据都证明,从结合亲和力、对接姿态和 ADMET(ADMET 是吸收、分布、代谢、排泄和毒性的缩写)特性分析来看,硝啶是抑制小管蛋白活性位点功能的潜在候选化合物。
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来源期刊
Vietnam Journal of Chemistry
Vietnam Journal of Chemistry CHEMISTRY, MULTIDISCIPLINARY-
CiteScore
1.70
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