In vitro and in silico Evaluation of Antibacterial Effects in Some Oxadiazole Compounds against Escherichia coli O157: H7

Yasin SarveAhrabi, Sarina Nejati Khoei
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Abstract

Background: Escherichia coli O157:H7 is a significant pathogen responsible for causing diarrhea in humans. Oxadiazoles are known for their diverse range of biological activities. Objectives: This study aimed to assess the anti-E. coli O157:H7 effects of 1, 3, and 4-oxadiazole derivatives. Methods: Compounds containing an oxadiazole central core were synthesized anew. In vitro assays, including agar well diffusion, minimum inhibitory concentration, and minimum bactericidal concentration, were conducted. The molecular structures of the oxadiazole derivatives were optimized using the mm2 methodology with Chem3D v20.1.1.125 software. The ligand's inhibitory potential against the active sites of stx-1 and stx-2 was assessed using Autodock Vina software. The results were analyzed using Discovery Studio v16.1.0 software. Results: The findings indicated that compound C ((2E)-3-(3,4-difluorophenyl)-2-(5-(hydroxy(pyridin-2-yl)meth yl)-1,3,4-oxadiazol-2-yl)-N-methylacrylimidic acid) exhibited more potent anti-E. coli O157:H7 effects compared to other compounds and the control sample. Furthermore, in silico results demonstrated that compound C exhibited inhibitory effects against stx-1 and stx-2 by forming hydrogen bonds for inhibition. Conclusions: Compounds featuring a fluorophenyl structure with a 1, 3, and 4-oxadiazole core have the potential to serve as anti-E. coli O157:H7 agents for the development of therapeutic drugs.
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某些噁二唑化合物对大肠杆菌 O157: H7 的抗菌作用的体外和硅学评估
背景:大肠杆菌 O157:H7 是导致人类腹泻的重要病原体。噁二唑具有多种生物活性。研究目的本研究旨在评估 1、3 和 4-噁二唑衍生物的抗大肠杆菌 O157:H7 作用。研究方法重新合成了含有恶二唑中心核的化合物。进行了体外试验,包括琼脂井扩散、最低抑菌浓度和最低杀菌浓度。利用 Chem3D v20.1.1.125 软件,采用 mm2 方法优化了噁二唑衍生物的分子结构。使用 Autodock Vina 软件评估了配体对 stx-1 和 stx-2 活性位点的抑制潜力。使用 Discovery Studio v16.1.0 软件对结果进行分析。结果:研究结果表明,与其他化合物和对照样品相比,化合物 C((2E)-3-(3,4-二氟苯基)-2-(5-(羟基(吡啶-2-基)甲基)-1,3,4-恶二唑-2-基)-N-甲基丙烯酰亚胺酸)具有更强的抗大肠杆菌 O157:H7 作用。此外,硅学研究结果表明,化合物 C 通过形成氢键对 stx-1 和 stx-2 具有抑制作用。结论:以 1、3 和 4-噁二唑为核心的氟苯基结构化合物有望作为抗大肠杆菌 O157:H7 的药物,用于开发治疗药物。
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