Novel aerobic anoxygenic phototrophic bacterium Jannaschia pagri sp. nov., isolated from seawater around a fish farm

Koyo Kuwata, Yuki Sato-Takabe, Ryosuke Nakai, Yuya Sugimura, Nozomi Tazato, Tadao Kunihiro, Sho Morohoshi, Mitsunori Iwataki, Koji Hamasaki, Takuhei Shiozaki
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Abstract

The genus Jannaschia is one of the representatives of aerobic anoxygenic phototrophic (AAP) bacteria, which is a strictly aerobic bacterium, producing a photosynthetic pigment bacteriochlorophyll (BChl) a. However, a part of the genus Jannaschia members have not been confirmed the photosynthetic ability. The partly presence of the ability in the genus Jannaschia could suggest the complexity of evolutionary history for anoxygenic photosynthesis in the genus, which is expected as gene loss and/or horizontal gene transfer. Here a novel AAP bacterium designated as strain AI_62T (= DSM 115720 T = NBRC 115938 T), was isolated from coastal seawater around a fish farm in the Uwa Sea, Japan. Its closest relatives were identified as Jannaschia seohaensis SMK-146 T (95.6% identity) and J. formosa 12N15T (94.6% identity), which have been reported to produce BChl a. The genomic characteristic of strain AI_62T clearly showed the possession of the anoxygenic photosynthesis related gene sets. This could be a useful model organism to approach the evolutionary mystery of anoxygenic photosynthesis in the genus Jannaschia. Based on a comprehensive consideration of both phylogenetic and phenotypic characteristics, we propose the classification of a novel species within the genus Jannaschia, designated as Jannaschia pagri sp. nov. The type strain for this newly proposed species is AI_62T (= DSM 115720 T = NBRC 115938 T).

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从一个养鱼场周围的海水中分离出的新型好氧性光营养细菌 Jannaschia pagri sp.
獐牙菜属是需氧无氧光合细菌(AAP)的代表之一,是一种严格需氧的细菌,能产生光合色素细菌叶绿素(BChl)a。该光合作用能力在獐牙菜属中的部分存在可能表明该属无氧光合作用进化历史的复杂性,预计会出现基因缺失和/或水平基因转移。在这里,从日本宇和海一个养鱼场周围的近海海水中分离出了一种新型 AAP 细菌,命名为菌株 AI_62T(= DSM 115720 T = NBRC 115938 T)。菌株 AI_62T 的基因组特征清楚地表明它拥有与缺氧光合作用相关的基因组。AI_62T菌株可以作为一个有用的模式生物来揭示獐牙菜属无氧光合作用的进化之谜。在综合考虑系统发育和表型特征的基础上,我们建议将其归类为 Jannaschia 属中的一个新物种,命名为 Jannaschia pagri sp.该新物种的模式菌株为 AI_62T(= DSM 115720 T = NBRC 115938 T)。
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来源期刊
CiteScore
5.60
自引率
11.50%
发文量
104
审稿时长
3 months
期刊介绍: Antonie van Leeuwenhoek publishes papers on fundamental and applied aspects of microbiology. Topics of particular interest include: taxonomy, structure & development; biochemistry & molecular biology; physiology & metabolic studies; genetics; ecological studies; especially molecular ecology; marine microbiology; medical microbiology; molecular biological aspects of microbial pathogenesis and bioinformatics.
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