Current progress and future prospects for understanding genetic diversity of seed plants in China

Yingjie Xiong, Yujie Zhao, Yuanyu He, Lina Zhao, Haihua Hu, Russell L. Barrett, Zhiduan Chen, Limin Lu
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Abstract

Genetic diversity represents the fundamental basis of biological variation within species, and is therefore the ultimate representation of biodiversity. Despite that all forms of diversity being defined by genomic differences, genetic diversity has received relatively less attention compared with species and ecosystem diversity. Here, we review recent literature and conclude that progress in understanding genetic diversity of seed plants, is strongly associated with advances in sequencing technology. We here present case studies to illustrate the application of genetic diversity for tracing crop domestication and delimiting species boundaries. Understanding genetic diversity is particularly critical for the field of conservation biology, and there is a clear shift to population‐level genetic studies to understand rare species. We then document additional factors that potentially influence genetic diversity, including climate change, habitat fragmentation, and species invasion. Finally, we identify current research limitations and propose directions for future studies. We highlight the need to develop broad‐scale genetic diversity knowledge, combined with other aspects of diversity to improve biodiversity conservation outcomes. We conclude that populating global databases with genomic‐scale sequence data for all species is an urgent and achievable goal now.
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了解中国种子植物遗传多样性的当前进展和未来展望
遗传多样性是物种内部生物变异的根本基础,因此也是生物多样性的最终体现。尽管所有形式的多样性都是由基因组差异定义的,但与物种和生态系统多样性相比,遗传多样性受到的关注相对较少。在此,我们回顾了最近的文献,并得出结论:在了解种子植物遗传多样性方面取得的进展与测序技术的进步密切相关。在此,我们通过案例研究来说明遗传多样性在作物驯化溯源和物种边界划分方面的应用。了解遗传多样性对保护生物学领域尤为重要,目前已明显转向种群级遗传研究,以了解稀有物种。然后,我们记录了可能影响遗传多样性的其他因素,包括气候变化、栖息地破碎化和物种入侵。最后,我们指出了当前研究的局限性,并提出了未来研究的方向。我们强调有必要发展广泛的遗传多样性知识,并将多样性的其他方面结合起来,以改善生物多样性保护成果。我们的结论是,用所有物种的基因组尺度序列数据充实全球数据库是一个紧迫而又可以实现的目标。
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