1H, 13C, and 15N resonance assignments of the La Motif of the human La-related protein 1

IF 0.8 4区 生物学 Q4 BIOPHYSICS Biomolecular NMR Assignments Pub Date : 2024-05-01 DOI:10.1007/s12104-024-10176-4
Benjamin C. Smith, Robert Silvers
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Abstract

Human La-related protein 1 (HsLARP1) is involved in post-transcriptional regulation of certain 5ʹ terminal oligopyrimidine (5ʹTOP) mRNAs as well as other mRNAs and binds to both the 5’TOP motif and the 3’-poly(A) tail of certain mRNAs. HsLARP1 is heavily involved in cell proliferation, cell cycle defects, and cancer, where HsLARP1 is significantly upregulated in malignant cells and tissues. Like all LARPs, HsLARP1 contains a folded RNA binding domain, the La motif (LaM). Our current understanding of post-transcriptional regulation that emanates from the intricate molecular framework of HsLARP1 is currently limited to small snapshots, obfuscating our understanding of the full picture on HsLARP1 functionality in post-transcriptional events. Here, we present the nearly complete resonance assignment of the LaM of HsLARP1, providing a significant platform for future NMR spectroscopic studies.

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人类 La 相关蛋白 1 的 La Motif 的 1H、13C 和 15N 共振赋值
人La相关蛋白1(HsLARP1)参与某些5ʹ末端寡嘧啶(5ʹTOP)mRNA及其他mRNA的转录后调控,并与某些mRNA的5'TOP图案和3'-poly(A)尾结合。HsLARP1 与细胞增殖、细胞周期缺陷和癌症密切相关,在恶性细胞和组织中,HsLARP1 会显著上调。与所有 LARPs 一样,HsLARP1 也含有一个折叠的 RNA 结合结构域 La motif(LaM)。目前,我们对 HsLARP1 错综复杂的分子框架所产生的转录后调控的了解仅限于小范围的快照,这模糊了我们对 HsLARP1 在转录后事件中功能的全貌的了解。在这里,我们展示了 HsLARP1 的 LaM 近乎完整的共振分配,为未来的核磁共振光谱研究提供了一个重要平台。
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来源期刊
Biomolecular NMR Assignments
Biomolecular NMR Assignments 生物-光谱学
CiteScore
1.70
自引率
11.10%
发文量
59
审稿时长
6-12 weeks
期刊介绍: Biomolecular NMR Assignments provides a forum for publishing sequence-specific resonance assignments for proteins and nucleic acids as Assignment Notes. Chemical shifts for NMR-active nuclei in macromolecules contain detailed information on molecular conformation and properties. Publication of resonance assignments in Biomolecular NMR Assignments ensures that these data are deposited into a public database at BioMagResBank (BMRB; http://www.bmrb.wisc.edu/), where they are available to other researchers. Coverage includes proteins and nucleic acids; Assignment Notes are processed for rapid online publication and are published in biannual online editions in June and December.
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