RPEM: Randomized Monte Carlo parametric expectation maximization algorithm

IF 3.1 3区 医学 Q2 PHARMACOLOGY & PHARMACY CPT: Pharmacometrics & Systems Pharmacology Pub Date : 2024-04-15 DOI:10.1002/psp4.13113
Rong Chen, Alan Schumitzky, Alona Kryshchenko, Keith Nieforth, Michael Tomashevskiy, Shuhua Hu, Romain Garreau, Julian Otalvaro, Walter Yamada, Michael N. Neely
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Abstract

Inspired from quantum Monte Carlo, by sampling discrete and continuous variables at the same time using the Metropolis–Hastings algorithm, we present a novel, fast, and accurate high performance Monte Carlo Parametric Expectation Maximization (MCPEM) algorithm. We named it Randomized Parametric Expectation Maximization (RPEM). We compared RPEM with NONMEM's Importance Sampling Method (IMP), Monolix's Stochastic Approximation Expectation Maximization (SAEM), and Certara's Quasi-Random Parametric Expectation Maximization (QRPEM) for a realistic two-compartment voriconazole model with ordinary differential equations using simulated data. We show that RPEM is as fast and as accurate as the algorithms IMP, QRPEM, and SAEM for the voriconazole model in reconstructing the population parameters, for the normal and log-normal cases.

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RPEM:随机蒙特卡罗参数期望最大化算法。
受量子蒙特卡罗的启发,通过使用 Metropolis-Hastings 算法同时对离散变量和连续变量进行采样,我们提出了一种新颖、快速、精确的高性能蒙特卡罗参数期望最大化(MCPEM)算法。我们将其命名为随机参数期望最大化算法(RPEM)。我们将 RPEM 与 NONMEM 的重要度采样法 (IMP)、Monolix 的随机逼近期望最大化 (SAEM) 和 Certara 的准随机参数期望最大化 (QRPEM) 进行了比较。我们的研究表明,对于伏立康唑模型,RPEM 与 IMP、QRPEM 和 SAEM 算法一样能快速、准确地重建正态和对数正态情况下的种群参数。
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CiteScore
5.00
自引率
11.40%
发文量
146
审稿时长
8 weeks
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