Classification of 2-node excitatory–inhibitory networks

IF 1.9 4区 数学 Q2 BIOLOGY Mathematical Biosciences Pub Date : 2024-05-04 DOI:10.1016/j.mbs.2024.109205
Manuela Aguiar , Ana Dias , Ian Stewart
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Abstract

We classify connected 2-node excitatory–inhibitory networks under various conditions. We assume that, as well as for connections, there are two distinct node-types, excitatory and inhibitory. In our classification we consider four different types of excitatory–inhibitory networks: restricted, partially restricted, unrestricted and completely unrestricted. For each type we give two different classifications. Using results on ODE-equivalence and minimality, we classify the ODE-classes and present a minimal representative for each ODE-class. We also classify all the networks with valence 2. These classifications are up to renumbering of nodes and the interchange of ‘excitatory’ and ‘inhibitory’ on nodes and arrows. These classifications constitute a first step towards analysing dynamics and bifurcations of excitatory–inhibitory networks. The results have potential applications to biological network models, especially neuronal networks, gene regulatory networks, and synthetic gene networks.

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双节点兴奋-抑制网络的分类。
我们在各种条件下对相连的双节点兴奋-抑制网络进行分类。我们假设,除了连接之外,还有两种不同的节点类型,即兴奋型和抑制型。在我们的分类中,我们考虑了四种不同类型的兴奋-抑制网络:受限型、部分受限型、不受限型和完全不受限型。对于每种类型,我们都给出了两种不同的分类。利用 ODE 等价性和最小性的结果,我们对 ODE 类进行了分类,并为每个 ODE 类提出了一个最小代表。我们还对价数≤2的所有网络进行了分类。这些分类是分析兴奋-抑制网络动力学和分岔的第一步。这些结果有可能应用于生物网络模型,特别是神经元网络、基因调控网络和合成基因网络。
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来源期刊
Mathematical Biosciences
Mathematical Biosciences 生物-生物学
CiteScore
7.50
自引率
2.30%
发文量
67
审稿时长
18 days
期刊介绍: Mathematical Biosciences publishes work providing new concepts or new understanding of biological systems using mathematical models, or methodological articles likely to find application to multiple biological systems. Papers are expected to present a major research finding of broad significance for the biological sciences, or mathematical biology. Mathematical Biosciences welcomes original research articles, letters, reviews and perspectives.
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