Quantifying cell cycle regulation by tissue crowding.

IF 3.2 3区 生物学 Q2 BIOPHYSICS Biophysical journal Pub Date : 2025-03-18 Epub Date: 2024-05-07 DOI:10.1016/j.bpj.2024.05.003
Carles Falcó, Daniel J Cohen, José A Carrillo, Ruth E Baker
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Abstract

The spatiotemporal coordination and regulation of cell proliferation is fundamental in many aspects of development and tissue maintenance. Cells have the ability to adapt their division rates in response to mechanical constraints, yet we do not fully understand how cell proliferation regulation impacts cell migration phenomena. Here, we present a minimal continuum model of cell migration with cell cycle dynamics, which includes density-dependent effects and hence can account for cell proliferation regulation. By combining minimal mathematical modeling, Bayesian inference, and recent experimental data, we quantify the impact of tissue crowding across different cell cycle stages in epithelial tissue expansion experiments. Our model suggests that cells sense local density and adapt cell cycle progression in response, during G1 and the combined S/G2/M phases, providing an explicit relationship between each cell-cycle-stage duration and local tissue density, which is consistent with several experimental observations. Finally, we compare our mathematical model's predictions to different experiments studying cell cycle regulation and present a quantitative analysis on the impact of density-dependent regulation on cell migration patterns. Our work presents a systematic approach for investigating and analyzing cell cycle data, providing mechanistic insights into how individual cells regulate proliferation, based on population-based experimental measurements.

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量化组织拥挤对细胞周期的调节。
细胞增殖的时空协调和调控在发育和组织维持的许多方面都至关重要。细胞有能力调整其分裂率以应对机械约束,但我们并不完全了解细胞增殖调控如何影响细胞迁移现象。在此,我们提出了一个具有细胞周期动力学的细胞迁移最小连续模型,该模型包括密度依赖效应,因此可以解释细胞增殖调控。通过结合最小数学模型、贝叶斯推理和最新实验数据,我们量化了上皮组织扩增实验中不同细胞周期阶段组织拥挤的影响。我们的模型表明,在 G1 和 S/G2/M 组合阶段,细胞会感知局部密度并调整细胞周期进程,在每个细胞周期阶段的持续时间和局部组织密度之间提供了明确的关系,这与一些实验观察结果是一致的。最后,我们将数学模型的预测与研究细胞周期调控的不同实验进行了比较,并就密度依赖性调控对细胞迁移模式的影响进行了定量分析。我们的工作提出了一种调查和分析细胞周期数据的系统方法,在基于群体的实验测量的基础上,提供了关于单个细胞如何调节增殖的机理见解。
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来源期刊
Biophysical journal
Biophysical journal 生物-生物物理
CiteScore
6.10
自引率
5.90%
发文量
3090
审稿时长
2 months
期刊介绍: BJ publishes original articles, letters, and perspectives on important problems in modern biophysics. The papers should be written so as to be of interest to a broad community of biophysicists. BJ welcomes experimental studies that employ quantitative physical approaches for the study of biological systems, including or spanning scales from molecule to whole organism. Experimental studies of a purely descriptive or phenomenological nature, with no theoretical or mechanistic underpinning, are not appropriate for publication in BJ. Theoretical studies should offer new insights into the understanding ofexperimental results or suggest new experimentally testable hypotheses. Articles reporting significant methodological or technological advances, which have potential to open new areas of biophysical investigation, are also suitable for publication in BJ. Papers describing improvements in accuracy or speed of existing methods or extra detail within methods described previously are not suitable for BJ.
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