Small but mighty: the rise of microprotein biology in neuroscience

IF 3.5 3区 医学 Q2 NEUROSCIENCES Frontiers in Molecular Neuroscience Pub Date : 2024-05-14 DOI:10.3389/fnmol.2024.1386219
Erin E. Duffy, Elena G. Assad, Brian T. Kalish, Michael E. Greenberg
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Abstract

The mammalian central nervous system coordinates a network of signaling pathways and cellular interactions, which enable a myriad of complex cognitive and physiological functions. While traditional efforts to understand the molecular basis of brain function have focused on well-characterized proteins, recent advances in high-throughput translatome profiling have revealed a staggering number of proteins translated from non-canonical open reading frames (ncORFs) such as 5′ and 3′ untranslated regions of annotated proteins, out-of-frame internal ORFs, and previously annotated non-coding RNAs. Of note, microproteins < 100 amino acids (AA) that are translated from such ncORFs have often been neglected due to computational and biochemical challenges. Thousands of putative microproteins have been identified in cell lines and tissues including the brain, with some serving critical biological functions. In this perspective, we highlight the recent discovery of microproteins in the brain and describe several hypotheses that have emerged concerning microprotein function in the developing and mature nervous system.
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小而强大:神经科学中微量蛋白生物学的兴起
哺乳动物的中枢神经系统协调着信号通路和细胞相互作用的网络,从而实现了无数复杂的认知和生理功能。虽然了解大脑功能分子基础的传统工作主要集中在表征良好的蛋白质上,但最近高通量翻译组剖析技术的进步揭示了从非规范开放阅读框(ncORF)翻译而来的蛋白质数量惊人,例如已注释蛋白质的5′和3′非翻译区、框架外内部ORF以及以前注释的非编码RNA。值得注意的是,由于计算和生物化学方面的挑战,从这些非编码 RNA 翻译而来的 100 个氨基酸(AA)的微蛋白往往被忽视。在细胞系和包括大脑在内的组织中已经发现了数千种假定的微蛋白,其中一些具有关键的生物学功能。在本视角中,我们将重点介绍最近在大脑中发现的微蛋白,并描述在发育和成熟的神经系统中出现的有关微蛋白功能的几种假说。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
CiteScore
5.70
自引率
2.10%
发文量
669
审稿时长
14 weeks
期刊介绍: Frontiers in Molecular Neuroscience is a first-tier electronic journal devoted to identifying key molecules, as well as their functions and interactions, that underlie the structure, design and function of the brain across all levels. The scope of our journal encompasses synaptic and cellular proteins, coding and non-coding RNA, and molecular mechanisms regulating cellular and dendritic RNA translation. In recent years, a plethora of new cellular and synaptic players have been identified from reduced systems, such as neuronal cultures, but the relevance of these molecules in terms of cellular and synaptic function and plasticity in the living brain and its circuits has not been validated. The effects of spine growth and density observed using gene products identified from in vitro work are frequently not reproduced in vivo. Our journal is particularly interested in studies on genetically engineered model organisms (C. elegans, Drosophila, mouse), in which alterations in key molecules underlying cellular and synaptic function and plasticity produce defined anatomical, physiological and behavioral changes. In the mouse, genetic alterations limited to particular neural circuits (olfactory bulb, motor cortex, cortical layers, hippocampal subfields, cerebellum), preferably regulated in time and on demand, are of special interest, as they sidestep potential compensatory developmental effects.
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