Regulatory role of AGC genes in heat stress adaptation in maize (Zea mays).

IF 2.6 4区 生物学 Q2 PLANT SCIENCES Functional Plant Biology Pub Date : 2024-05-01 DOI:10.1071/FP23282
Abdul Rehman, Khairiah Mubarak Alwutayd, Dikhnah Alshehri, Ibtisam Mohammed Alsudays, Farrukh Azeem, Shahroz Rahman, Muhammad Abid, Asad Ali Shah
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Abstract

Heat stress represents a significant environmental challenge that restricts maize (Zea mays ) growth and yield on a global scale. Within the plant kingdom, the AGC gene family, encoding a group of protein kinases, has emerged as crucial players in various stress responses. Nevertheless, a comprehensive understanding of AGC genes in Z. mays under heat-stress conditions remains elusive. A genome-wide analysis was done using bioinformatics techniques to identify 39 AGC genes in Z. mays , categorising them into three subfamilies based on their conserved domains. We investigated their phylogenetic relationships, gene structures (including intron-exon configurations), and expression patterns. These genes are likely involved in diverse signalling pathways, fulfilling distinct roles when exposed to heat stress conditions. Notably, most ZmAGC1.5, ZmAGC1.9, ZmNDR3, ZmNDR5 and ZmIRE3 exhibited significant changes in expression levels under heat stress, featuring a high G-box ratio. Furthermore, we pinpointed a subset of AGC genes displaying highly coordinated expression, implying their potential involvement in the heat stress response pathway. Our study offers valuable insights into the contribution of AGC genes to Z. mays 's heat stress response, thus facilitating the development of heat-tolerant Z. mays varieties.

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AGC 基因在玉米(Zea mays)热胁迫适应中的调控作用。
热胁迫是制约全球玉米(Zea mays)生长和产量的重大环境挑战。在植物王国中,编码一组蛋白激酶的 AGC 基因家族已成为各种胁迫响应中的关键角色。然而,对热胁迫条件下玉米中的 AGC 基因的全面了解仍然遥遥无期。我们利用生物信息学技术进行了全基因组分析,在 Z. mays 中鉴定出 39 个 AGC 基因,并根据其保守结构域将其分为三个亚家族。我们研究了它们的系统发育关系、基因结构(包括内含子-外显子配置)和表达模式。这些基因可能参与了不同的信号通路,在暴露于热胁迫条件下发挥着不同的作用。值得注意的是,大多数 ZmAGC1.5、ZmAGC1.9、ZmNDR3、ZmNDR5 和 ZmIRE3 在热胁迫下的表达水平有显著变化,具有较高的 G-box 比率。此外,我们还发现了一组高度协调表达的 AGC 基因,这意味着它们可能参与了热胁迫响应途径。我们的研究为了解 AGC 基因对玉米热胁迫响应的贡献提供了有价值的见解,从而有助于培育耐热玉米品种。
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来源期刊
Functional Plant Biology
Functional Plant Biology 生物-植物科学
CiteScore
5.50
自引率
3.30%
发文量
156
审稿时长
1 months
期刊介绍: Functional Plant Biology (formerly known as Australian Journal of Plant Physiology) publishes papers of a broad interest that advance our knowledge on mechanisms by which plants operate and interact with environment. Of specific interest are mechanisms and signal transduction pathways by which plants adapt to extreme environmental conditions such as high and low temperatures, drought, flooding, salinity, pathogens, and other major abiotic and biotic stress factors. FPB also encourages papers on emerging concepts and new tools in plant biology, and studies on the following functional areas encompassing work from the molecular through whole plant to community scale. FPB does not publish merely phenomenological observations or findings of merely applied significance. Functional Plant Biology is published with the endorsement of the Commonwealth Scientific and Industrial Research Organisation (CSIRO) and the Australian Academy of Science. Functional Plant Biology is published in affiliation with the Federation of European Societies of Plant Biology and in Australia, is associated with the Australian Society of Plant Scientists and the New Zealand Society of Plant Biologists.
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