Enhancing clinical diagnostics: novel denoising methodology for brain MRI with adaptive masking and modified non-local block.

IF 2.6 4区 医学 Q2 COMPUTER SCIENCE, INTERDISCIPLINARY APPLICATIONS Medical & Biological Engineering & Computing Pub Date : 2024-10-01 Epub Date: 2024-05-18 DOI:10.1007/s11517-024-03122-y
A Velayudham, K Madhan Kumar, Krishna Priya M S
{"title":"Enhancing clinical diagnostics: novel denoising methodology for brain MRI with adaptive masking and modified non-local block.","authors":"A Velayudham, K Madhan Kumar, Krishna Priya M S","doi":"10.1007/s11517-024-03122-y","DOIUrl":null,"url":null,"abstract":"<p><p>Medical image denoising has been a subject of extensive research, with various techniques employed to enhance image quality and facilitate more accurate diagnostics. The evolution of denoising methods has highlighted impressive results but struggled to strike equilibrium between noise reduction and edge preservation which limits its applicability in various domains. This paper manifests the novel methodology that integrates an adaptive masking strategy, transformer-based U-Net Prior generator, edge enhancement module, and modified non-local block (MNLB) for denoising brain MRI clinical images. The adaptive masking strategy maintains the vital information through dynamic mask generation while the prior generator by capturing hierarchical features regenerates the high-quality prior MRI images. Finally, these images are fed to the edge enhancement module to boost structural information by maintaining crucial edge details, and the MNLB produces the denoised output by deriving non-local contextual information. The comprehensive experimental assessment is performed by employing two datasets namely the brain tumor MRI dataset and Alzheimer's dataset for diverse metrics and compared with conventional denoising approaches. The proposed denoising methodology achieves a PSNR of 40.965 and SSIM of 0.938 on the Alzheimer's dataset and also achieves a PSNR of 40.002 and SSIM of 0.926 on the brain tumor MRI dataset at a noise level of 50% revealing its supremacy in noise minimization. Furthermore, the impact of different masking ratios on denoising performance is analyzed which reveals that the proposed method showed PSNR of 40.965, SSIM of 0.938, MAE of 5.847, and MSE of 3.672 at the masking ratio of 60%. Moreover, the findings pave the way for the advancement of clinical image processing, facilitating precise detection of tumors in clinical MRI images.</p>","PeriodicalId":49840,"journal":{"name":"Medical & Biological Engineering & Computing","volume":" ","pages":"3043-3056"},"PeriodicalIF":2.6000,"publicationDate":"2024-10-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Medical & Biological Engineering & Computing","FirstCategoryId":"5","ListUrlMain":"https://doi.org/10.1007/s11517-024-03122-y","RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2024/5/18 0:00:00","PubModel":"Epub","JCR":"Q2","JCRName":"COMPUTER SCIENCE, INTERDISCIPLINARY APPLICATIONS","Score":null,"Total":0}
引用次数: 0

Abstract

Medical image denoising has been a subject of extensive research, with various techniques employed to enhance image quality and facilitate more accurate diagnostics. The evolution of denoising methods has highlighted impressive results but struggled to strike equilibrium between noise reduction and edge preservation which limits its applicability in various domains. This paper manifests the novel methodology that integrates an adaptive masking strategy, transformer-based U-Net Prior generator, edge enhancement module, and modified non-local block (MNLB) for denoising brain MRI clinical images. The adaptive masking strategy maintains the vital information through dynamic mask generation while the prior generator by capturing hierarchical features regenerates the high-quality prior MRI images. Finally, these images are fed to the edge enhancement module to boost structural information by maintaining crucial edge details, and the MNLB produces the denoised output by deriving non-local contextual information. The comprehensive experimental assessment is performed by employing two datasets namely the brain tumor MRI dataset and Alzheimer's dataset for diverse metrics and compared with conventional denoising approaches. The proposed denoising methodology achieves a PSNR of 40.965 and SSIM of 0.938 on the Alzheimer's dataset and also achieves a PSNR of 40.002 and SSIM of 0.926 on the brain tumor MRI dataset at a noise level of 50% revealing its supremacy in noise minimization. Furthermore, the impact of different masking ratios on denoising performance is analyzed which reveals that the proposed method showed PSNR of 40.965, SSIM of 0.938, MAE of 5.847, and MSE of 3.672 at the masking ratio of 60%. Moreover, the findings pave the way for the advancement of clinical image processing, facilitating precise detection of tumors in clinical MRI images.

Abstract Image

查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
增强临床诊断:利用自适应遮蔽和修改的非局部块对脑部磁共振成像进行去噪的新方法。
医学图像去噪一直是广泛研究的课题,各种技术被用于提高图像质量和促进更准确的诊断。去噪方法的发展取得了令人瞩目的成果,但在降噪和边缘保护之间难以取得平衡,这限制了其在各个领域的适用性。本文介绍了一种整合了自适应掩蔽策略、基于变压器的 U-Net Prior 生成器、边缘增强模块和修正的非局部块(MNLB)的新方法,用于脑部 MRI 临床图像的去噪。自适应掩蔽策略通过动态掩蔽生成来保持重要信息,而先验生成器则通过捕捉分层特征来重新生成高质量的先验 MRI 图像。最后,这些图像被输送到边缘增强模块,通过保持关键边缘细节来增强结构信息,而 MNLB 则通过获取非本地上下文信息来生成去噪输出。通过使用两个数据集,即脑肿瘤磁共振成像数据集和阿尔茨海默氏症数据集,对不同指标进行了全面的实验评估,并与传统的去噪方法进行了比较。建议的去噪方法在阿尔茨海默病数据集上的 PSNR 为 40.965,SSIM 为 0.938;在噪声水平为 50% 的脑肿瘤 MRI 数据集上的 PSNR 为 40.002,SSIM 为 0.926,显示了其在噪声最小化方面的优势。此外,还分析了不同掩蔽率对去噪性能的影响,结果表明,在掩蔽率为 60% 时,拟议方法的 PSNR 为 40.965,SSIM 为 0.938,MAE 为 5.847,MSE 为 3.672。此外,研究结果为临床图像处理的进步铺平了道路,有助于在临床核磁共振图像中精确检测肿瘤。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 去求助
来源期刊
Medical & Biological Engineering & Computing
Medical & Biological Engineering & Computing 医学-工程:生物医学
CiteScore
6.00
自引率
3.10%
发文量
249
审稿时长
3.5 months
期刊介绍: Founded in 1963, Medical & Biological Engineering & Computing (MBEC) continues to serve the biomedical engineering community, covering the entire spectrum of biomedical and clinical engineering. The journal presents exciting and vital experimental and theoretical developments in biomedical science and technology, and reports on advances in computer-based methodologies in these multidisciplinary subjects. The journal also incorporates new and evolving technologies including cellular engineering and molecular imaging. MBEC publishes original research articles as well as reviews and technical notes. Its Rapid Communications category focuses on material of immediate value to the readership, while the Controversies section provides a forum to exchange views on selected issues, stimulating a vigorous and informed debate in this exciting and high profile field. MBEC is an official journal of the International Federation of Medical and Biological Engineering (IFMBE).
期刊最新文献
Multi-file dynamic compression method based on classification algorithm in DNA storage. Continuous mobile measurement of camptocormia angle using four accelerometers. Modeling and control of COVID-19 disease using deep reinforcement learning method. Left ventricle diastolic vortex ring characterization in ischemic cardiomyopathy: insight into atrio-ventricular interplay. DNN-BP: a novel framework for cuffless blood pressure measurement from optimal PPG features using deep learning model.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1