Evaluating the genetic variability in selected accessions of medicinal legume Mucuna pruriens (L) DC through ISSR markers

Q3 Agricultural and Biological Sciences Ecological Genetics and Genomics Pub Date : 2024-05-16 DOI:10.1016/j.egg.2024.100262
N. Seema Devi , Ravi Rajwanshi , K.P. Mohapatra
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Abstract

Mucuna pruriens, a widely available but underutilized legume in India, stands out for its nutritional and medicinal potential. Understanding the genetic diversity of M. pruriens is vital for its conservation and utilization in breeding programs aimed at enhancing its nutritional and agronomic traits. In this regard, molecular markers like ISSRs offer a reliable and informative tool for assessing genetic diversity. In the present study, 23 M. pruriens accessions from northeastern India were evaluated using ISSR markers, revealing high levels of polymorphism and significant genetic diversity. A total of 512 amplicons were generated across 33 ISSR primers, with an average polymorphic percentage of 98.05 %. PIC values ranged from 0.22 to 0.50, indicating substantial genetic variation within the accessions. Supplementary indicators such as EMR and MI were employed to evaluate the marker system's efficacy. EMR ranged from 6 to 22, averaging 14.95, while MI ranged from 2.64 to 9.02, averaging 6.04, with a positive correlation observed between EMR and MI. Cluster analysis based on Jaccard's similarity coefficient classified the accessions into two major groups, with the northeastern Indian accessions displaying higher diversity compared to those from other regions of India. Interestingly, geographical proximity did not consistently correlate with genetic similarity, suggesting complex patterns of gene flow and historical germplasm exchange. Overall, this study provides valuable insights into the genetic diversity of M. pruriens and highlights the importance of conserving and utilizing this underutilized legume for addressing global food security challenges.

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通过 ISSR 标记评估药用豆科植物 Mucuna pruriens (L) DC 的部分基因变异性
毛果芸香科植物(Mucuna pruriens)是印度一种广泛种植但利用率不高的豆科植物,其营养和药用潜力十分突出。了解杜仲的遗传多样性对于保护杜仲并将其用于旨在提高其营养和农艺性状的育种计划至关重要。在这方面,ISSRs 等分子标记为评估遗传多样性提供了一种可靠且信息丰富的工具。本研究使用 ISSR 标记对印度东北部的 23 个 M. pruriens 参试品进行了评估,结果表明这些参试品具有高水平的多态性和显著的遗传多样性。33 个 ISSR 引物共产生了 512 个扩增子,平均多态性百分比为 98.05%。PIC 值从 0.22 到 0.50 不等,表明加入物内部存在大量遗传变异。我们还采用了 EMR 和 MI 等补充指标来评估标记系统的功效。EMR 在 6 到 22 之间,平均为 14.95,而 MI 在 2.64 到 9.02 之间,平均为 6.04,EMR 和 MI 之间呈正相关。基于 Jaccard 相似性系数的聚类分析将加入物分为两大类,与印度其他地区的加入物相比,印度东北部的加入物显示出更高的多样性。有趣的是,地理邻近性与遗传相似性并不一致,这表明基因流动和历史种质交流的模式很复杂。总之,这项研究为了解芸苔属植物的遗传多样性提供了宝贵的见解,并强调了保护和利用这种未充分利用的豆科植物以应对全球粮食安全挑战的重要性。
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来源期刊
Ecological Genetics and Genomics
Ecological Genetics and Genomics Agricultural and Biological Sciences-Ecology, Evolution, Behavior and Systematics
CiteScore
1.80
自引率
0.00%
发文量
44
期刊介绍: Ecological Genetics and Genomics publishes ecological studies of broad interest that provide significant insight into ecological interactions or/ and species diversification. New data in these areas are published as research papers, or methods and resource reports that provide novel information on technologies or tools that will be of interest to a broad readership. Complete data sets are shared where appropriate. The journal also provides Reviews, and Perspectives articles, which present commentary on the latest advances published both here and elsewhere, placing such progress in its broader biological context. Topics include: -metagenomics -population genetics/genomics -evolutionary ecology -conservation and molecular adaptation -speciation genetics -environmental and marine genomics -ecological simulation -genomic divergence of organisms
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