Loop-mediated isothermal amplification (LAMP) assays for Aedes and Culex species and evaluation of a simple DNA preparation method for field application

IF 1.7 3区 农林科学 Q2 ENTOMOLOGY Journal of Applied Entomology Pub Date : 2024-05-14 DOI:10.1111/jen.13273
Tim Kamber, Alexander Mathis
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Abstract

The spatial pattern of many pathogens that are transmitted by mosquitoes (Diptera: Culicidae) is changing due to globalization and climate change. Thus, surveillance of mosquito vectors is becoming increasingly widespread as basis for risk assessment and control. Species identification by loop-mediated isothermal amplification (LAMP) assays is simple, fast and reliable. Specific primers for several mosquito species are available (Aedes aegypti, Aedes albopictus, Aedes geniculatus, Aedes japonicus, Aedes koreicus, species of the Anopheles funestus group and An. gambiae complex). In the present work, LAMP assays targeting the rDNA internal transcribed spacer region were developed for Ae. cretinus, a minor sister taxon of Ae. albopictus, and for Culex pipiens/Culex quinquefasciatus and Culex torrentium. The specificities of the primers designed in silico were confirmed by in vitro tests with DNA form non-target species. Further, the release of DNA from mosquito stages (eggs, larvae, pupae, adults) was investigated, revealing that an incubation for 5 min at 80°C in water is suitable for LAMP. With this method, one specimen (egg, larva, pupa, adult) of a target species could be detected among 49 non-targets. Thus, the assays are suitable for fast and reliable identification of mosquito species of all life stages by colour change visible to the naked eye, and they are operable under field conditions.

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针对伊蚊和库蚊物种的环路介导等温扩增(LAMP)测定法以及对现场应用的简单 DNA 制备方法的评估
由于全球化和气候变化,许多通过蚊子(双翅目:蚊科)传播的病原体的空间模式正在发生变化。因此,作为风险评估和控制的基础,对蚊子媒介的监测正变得越来越广泛。利用环介导等温扩增(LAMP)检测法进行物种鉴定简单、快速、可靠。目前已有针对多个蚊子物种(埃及伊蚊、白纹伊蚊、玄色伊蚊、日本伊蚊、韩国伊蚊、疟蚊和冈比亚伊蚊)的特异性引物。在本研究中,针对白纹伊蚊的次要姊妹类群克氏伊蚊(Ae. cretinus)以及库蚊(Culex pipiens/Culex quinquefasciatus)和库蚊(Culex torrentium)开发了针对 rDNA 内部转录间隔区的 LAMP 检测方法。用非目标物种的 DNA 进行的体外测试证实了硅设计引物的特异性。此外,还研究了从蚊子各阶段(卵、幼虫、蛹、成虫)释放 DNA 的情况,结果表明在 80°C 水温下孵育 5 分钟适用于 LAMP。通过这种方法,可以在 49 个非目标物种中检测到一个目标物种的标本(卵、幼虫、蛹、成虫)。因此,这种检测方法适用于通过肉眼可见的颜色变化快速可靠地鉴定蚊子各个生命阶段的种类,而且可以在野外条件下操作。
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来源期刊
CiteScore
3.40
自引率
5.30%
发文量
132
审稿时长
6 months
期刊介绍: The Journal of Applied Entomology publishes original articles on current research in applied entomology, including mites and spiders in terrestrial ecosystems. Submit your next manuscript for rapid publication: the average time is currently 6 months from submission to publication. With Journal of Applied Entomology''s dynamic article-by-article publication process, Early View, fully peer-reviewed and type-set articles are published online as soon as they complete, without waiting for full issue compilation.
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