Identification of the mutual gliding locus as a factor for gut colonization in non-native bee hosts using the ARTP mutagenesis.

IF 13.8 1区 生物学 Q1 MICROBIOLOGY Microbiome Pub Date : 2024-05-23 DOI:10.1186/s40168-024-01813-0
Yujie Meng, Xue Zhang, Yifan Zhai, Yuan Li, Zenghua Shao, Shanshan Liu, Chong Zhang, Xin-Hui Xing, Hao Zheng
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Abstract

Background: The gut microbiota and their hosts profoundly affect each other's physiology and evolution. Identifying host-selected traits is crucial to understanding the processes that govern the evolving interactions between animals and symbiotic microbes. Current experimental approaches mainly focus on the model bacteria, like hypermutating Escherichia coli or the evolutionary changes of wild stains by host transmissions. A method called atmospheric and room temperature plasma (ARTP) may overcome the bottleneck of low spontaneous mutation rates while maintaining mild conditions for the gut bacteria.

Results: We established an experimental symbiotic system with gnotobiotic bee models to unravel the molecular mechanisms promoting host colonization. By in vivo serial passage, we tracked the genetic changes of ARTP-treated Snodgrassella strains from Bombus terrestris in the non-native honeybee host. We observed that passaged isolates showing genetic changes in the mutual gliding locus have a competitive advantage in the non-native host. Specifically, alleles in the orphan mglB, the GTPase activating protein, promoted colonization potentially by altering the type IV pili-dependent motility of the cells. Finally, competition assays confirmed that the mutations out-competed the ancestral strain in the non-native honeybee gut but not in the native host.

Conclusions: Using the ARTP mutagenesis to generate a mutation library of gut symbionts, we explored the potential genetic mechanisms for improved gut colonization in non-native hosts. Our findings demonstrate the implication of the cell mutual-gliding motility in host association and provide an experimental system for future study on host-microbe interactions. Video Abstract.

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利用ARTP诱变技术,确定相互滑行基因座是非本地蜜蜂宿主肠道定殖的一个因素。
背景:肠道微生物群及其宿主深刻影响着彼此的生理和进化。确定宿主选择的性状对于理解动物与共生微生物之间不断演化的相互作用过程至关重要。目前的实验方法主要集中在模式菌上,如高突变大肠杆菌或通过宿主传播改变野生污点的进化过程。一种名为大气和室温等离子体(ARTP)的方法可以克服自发突变率低的瓶颈,同时保持肠道细菌的温和条件:结果:我们建立了一个与非生物蜜蜂模型共生的实验系统,以揭示促进宿主定殖的分子机制。通过体内连续传代,我们追踪了经ARTP处理过的Bombus terrestris Snodgrassella菌株在非本地蜜蜂宿主中的基因变化。我们观察到,在相互滑行基因座上出现遗传变化的分离株在非本地宿主中具有竞争优势。具体来说,孤儿mglB(GTP酶激活蛋白)中的等位基因可能通过改变细胞的IV型纤毛依赖性运动来促进定殖。最后,竞争试验证实,突变株在非本地蜜蜂肠道中的竞争能力超过了祖先菌株,但在本地宿主中则没有:我们利用 ARTP 诱变技术生成了一个肠道共生菌突变库,探索了改善非本地宿主肠道定殖的潜在遗传机制。我们的发现证明了细胞相互滑动运动在宿主联合中的作用,并为今后研究宿主与微生物的相互作用提供了一个实验系统。视频摘要。
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来源期刊
Microbiome
Microbiome MICROBIOLOGY-
CiteScore
21.90
自引率
2.60%
发文量
198
审稿时长
4 weeks
期刊介绍: Microbiome is a journal that focuses on studies of microbiomes in humans, animals, plants, and the environment. It covers both natural and manipulated microbiomes, such as those in agriculture. The journal is interested in research that uses meta-omics approaches or novel bioinformatics tools and emphasizes the community/host interaction and structure-function relationship within the microbiome. Studies that go beyond descriptive omics surveys and include experimental or theoretical approaches will be considered for publication. The journal also encourages research that establishes cause and effect relationships and supports proposed microbiome functions. However, studies of individual microbial isolates/species without exploring their impact on the host or the complex microbiome structures and functions will not be considered for publication. Microbiome is indexed in BIOSIS, Current Contents, DOAJ, Embase, MEDLINE, PubMed, PubMed Central, and Science Citations Index Expanded.
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