A structured iterative division approach for non-sparse regression models and applications in biological data analysis.

IF 1.6 3区 医学 Q3 HEALTH CARE SCIENCES & SERVICES Statistical Methods in Medical Research Pub Date : 2024-07-01 Epub Date: 2024-05-23 DOI:10.1177/09622802241254251
Shun Yu, Yuehan Yang
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Abstract

In this paper, we focus on the modeling problem of estimating data with non-sparse structures, specifically focusing on biological data that exhibit a high degree of relevant features. Various fields, such as biology and finance, face the challenge of non-sparse estimation. We address the problems using the proposed method, called structured iterative division. Structured iterative division effectively divides data into non-sparse and sparse structures and eliminates numerous irrelevant variables, significantly reducing the error while maintaining computational efficiency. Numerical and theoretical results demonstrate the competitive advantage of the proposed method on a wide range of problems, and the proposed method exhibits excellent statistical performance in numerical comparisons with several existing methods. We apply the proposed algorithm to two biology problems, gene microarray datasets, and chimeric protein datasets, to the prognostic risk of distant metastasis in breast cancer and Alzheimer's disease, respectively. Structured iterative division provides insights into gene identification and selection, and we also provide meaningful results in anticipating cancer risk and identifying key factors.

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非稀疏回归模型的结构化迭代分割方法及其在生物数据分析中的应用
在本文中,我们将重点关注估计非稀疏结构数据的建模问题,特别是关注表现出高度相关特征的生物数据。生物学和金融学等多个领域都面临着非稀疏估计的挑战。我们提出了一种名为结构化迭代除法的方法来解决这些问题。结构化迭代除法能有效地将数据分为非稀疏结构和稀疏结构,并消除大量无关变量,在保持计算效率的同时显著降低误差。数值和理论结果表明了所提方法在各种问题上的竞争优势,在与几种现有方法的数值比较中,所提方法表现出了优异的统计性能。我们将提出的算法应用于两个生物学问题,即基因芯片数据集和嵌合蛋白数据集,分别用于乳腺癌和阿尔茨海默病远处转移的预后风险。结构化迭代划分为基因识别和选择提供了见解,我们还在预测癌症风险和识别关键因素方面提供了有意义的结果。
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来源期刊
Statistical Methods in Medical Research
Statistical Methods in Medical Research 医学-数学与计算生物学
CiteScore
4.10
自引率
4.30%
发文量
127
审稿时长
>12 weeks
期刊介绍: Statistical Methods in Medical Research is a peer reviewed scholarly journal and is the leading vehicle for articles in all the main areas of medical statistics and an essential reference for all medical statisticians. This unique journal is devoted solely to statistics and medicine and aims to keep professionals abreast of the many powerful statistical techniques now available to the medical profession. This journal is a member of the Committee on Publication Ethics (COPE)
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