Development of orthogonal aminoacyl-tRNA synthetase mutant for incorporating a non-canonical amino acid.

IF 3.5 3区 生物学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY AMB Express Pub Date : 2024-05-24 DOI:10.1186/s13568-024-01706-3
Dongheon Lee, Ja Gyung Kim, Tae Wan Kim, Jong-Il Choi
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Abstract

Genetic code expansion involves introducing non-canonical amino acids (ncAAs) with unique functional groups into proteins to broaden their applications. Orthogonal aminoacyl tRNA synthetase (aaRS), essential for genetic code expansion, facilitates the charging of ncAAs to tRNA. In this study, we developed a new aaRS mutant from Methanosaeta concilii tyrosyl-tRNA synthetase (Mc TyrRS) to incorporate para-azido-L-phenylalanine (AzF). The development involved initial site-specific mutations in Mc TyrRS, followed by random mutagenesis. The new aaRS mutant with amber suppression was isolated through fluorescence-activated cell sorting. The M. concilii aaRS mutant structure was further analyzed to interpret the effect of mutations. This research provides a novel orthogonal aaRS evolution pipeline for highly efficient ncAA incorporation that will contribute to developing novel aaRS from various organisms.

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开发正交氨基酰-tRNA 合成酶突变体,以整合非规范氨基酸。
遗传密码扩增是指在蛋白质中引入具有独特功能基团的非规范氨基酸(ncAAs),以扩大蛋白质的应用范围。正交氨基酰 tRNA 合成酶(araRS)是遗传密码扩增所必需的,它有助于将 ncAAs 装入 tRNA。在这项研究中,我们从Methanosaeta concilii酪氨酰-tRNA合成酶(Mc TyrRS)中开发了一种新的aaRS突变体,以结合对位叠氮-L-苯丙氨酸(AzF)。开发过程包括对 Mc TyrRS 进行最初的特定位点突变,然后进行随机诱变。通过荧光激活细胞分选分离出了具有琥珀色抑制作用的新 aaRS 突变体。进一步分析了 M. concilii aaRS 突变体的结构,以解释突变的影响。这项研究提供了一种新型的正交 aaRS 进化管道,可实现高效的 ncAA 结合,将有助于从各种生物中开发新型 aaRS。
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来源期刊
AMB Express
AMB Express BIOTECHNOLOGY & APPLIED MICROBIOLOGY-
CiteScore
7.20
自引率
2.70%
发文量
141
审稿时长
13 weeks
期刊介绍: AMB Express is a high quality journal that brings together research in the area of Applied and Industrial Microbiology with a particular interest in ''White Biotechnology'' and ''Red Biotechnology''. The emphasis is on processes employing microorganisms, eukaryotic cell cultures or enzymes for the biosynthesis, transformation and degradation of compounds. This includes fine and bulk chemicals, polymeric compounds and enzymes or other proteins. Downstream processes are also considered. Integrated processes combining biochemical and chemical processes are also published.
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