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Optimization of a fatty acid methyl ester protocol for quantification of odd- and even-chain fatty acids in yeast. 酵母中奇数链和偶数链脂肪酸的脂肪酸甲酯定量方法的优化。
IF 3.7 3区 生物学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2026-02-09 DOI: 10.1186/s13568-026-02022-8
Veronica Bonzanini, Otto Savolainen, Sergio Morales Palomo, Majid Haddad Momeni, Lisbeth Olsson, Cecilia Geijer
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引用次数: 0
Growth optimization and dual cellulolytic degradation pathways in Serpula lacrymans. 泪蕨的生长优化和双纤维素降解途径。
IF 3.7 3区 生物学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2026-02-08 DOI: 10.1186/s13568-026-02009-5
Katsiaryna Kakhanouskaya, Aliaksandr Kakhanouski

Serpula lacrymans is the most destructive brown-rot fungus affecting timber in temperate regions, causing severe economic losses in construction and cultural heritage. Conventional chemical treatments are largely ineffective, as they act only on wood surfaces and fail to eradicate fungal growth within deeper layers. Previous studies have described the cellulolytic activity of S. lacrymans as weak and strictly substrate-inducible, despite genomic evidence for GH12-type endoglucanases. Moreover, cultivation in traditional malt- or CMC-based media often yields insufficient biomass, limiting reproducibility of biochemical assays and obscuring the true enzymatic spectrum. Here, we report that cultivation in Murashige-Skoog salt medium supplemented with sucrose markedly improves biomass yield and metabolite accumulation, enabling reliable physiological and enzymatic analyses. Our findings reveal basal endoglucanase activity and demonstrate that S. lacrymans employs both hydrolytic and Fenton-like oxidative mechanisms in cellulose degradation. These insights advance the understanding of its decay system and provide a foundation for developing biological control strategies against this highly destructive fungus.

森林褐腐菌是温带地区影响木材的最具破坏性的褐腐菌,对建筑和文化遗产造成严重的经济损失。传统的化学处理在很大程度上是无效的,因为它们只对木材表面起作用,不能根除更深层次的真菌生长。先前的研究已经描述了S. lacrymans的纤维素分解活性弱,严格地由底物诱导,尽管基因组证据表明gh12型内切葡聚糖酶。此外,在传统的以麦芽或cmc为基础的培养基中培养往往产生的生物量不足,限制了生化分析的可重复性,并模糊了真正的酶谱。在这里,我们报道了在添加蔗糖的Murashige-Skoog盐培养基中培养可显著提高生物量产量和代谢物积累,从而实现可靠的生理和酶分析。我们的研究结果揭示了基本的内核葡聚糖酶活性,并证明了S. lacrymans在纤维素降解中同时采用水解和芬顿样氧化机制。这些见解促进了对其腐烂系统的理解,并为开发针对这种高度破坏性真菌的生物防治策略提供了基础。
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引用次数: 0
Feeding different proportion of oat silage in feedlot diets: effects on rumen function and meat quality of Tibetan sheep. 饲粮中饲喂不同比例的燕麦青贮对藏羊瘤胃功能和肉品质的影响
IF 3.7 3区 生物学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2026-02-04 DOI: 10.1186/s13568-026-02015-7
Xianhua Zhang, Rengeerli Sa, Wei Gao, Yu Zhang, Lijuan Han, Shengzhen Hou, Zenghai Luo, Linsheng Gui
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引用次数: 0
Repurposed bunamidine disrupts envelope energetics and induces ROS-mediated non-lytic killing. 重新利用的布纳脒破坏包膜能量学并诱导ros介导的非裂解性杀伤。
IF 3.7 3区 生物学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2026-02-04 DOI: 10.1186/s13568-026-02016-6
Guanqing Huang, Shaowei Guo, Dan Xiao, Yiqing Liu, Mengna Li, Lihua Lu, Yelan Hong, Yimin Li, Mingxiang Zou, Yong Wu
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引用次数: 0
Rumen-protected betaine supplementation improves ileal function by affecting microbe and metabolite in Tibetan sheep. 甜菜碱通过影响藏羊瘤胃保护菌群和代谢产物改善其回肠功能。
IF 3.7 3区 生物学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2026-02-04 DOI: 10.1186/s13568-026-02024-6
Wei Gao, Zhenling Wu, Jiacheng Gan, Xianhua Zhang, Chengdi Shi, Zhenglu Yang, Quyangangmao Su, Shengzhen Hou, Lijuan Han, Linsheng Gui

The research explored the effect of dietary rumen-protected betaine (RPB) supplementation on development and function of ileum in Tibetan sheep. Sixty male lambs (17.72 ± 0.19 kg, aged 2 months) were randomly divided into control group (Ctrl) and RPB group (0.08% Bet). The adaptation feeding period was 10 days, and the experimental period was 90 days. Results suggested that dietary RPB significantly increased villus height, villus height-to-crypt depth (VH/CD) ratio, total antioxidant capacity (T-AOC) (P < 0.05), and decreased malondialdehyde (MDA), lipopolysaccharide (LPS), tumor necrosis factor-α (TNF-α) (P < 0.05), as well as altered the composition of short-chain fatty acids (SCFAs). Importantly, expression of ileal barrier-related gene (Claudin-1) was elevated (P < 0.05). Microbial analyses showed RPB supplementation increased the relative abundances of Aeriscardovia and Bifidobacterium. Several differential metabolites, including Cer 18:1;2O/18:0, Cer 18:1;2O/24:2 and (±)13-HpODE, were significantly increased in the RPB group (P < 0.05). The VH/CD was positively correlated with Bifidobacterium, Cer 18:1;2O/18:0, Cer 18:1;2O/24:2 and (±)13-HpODE (r > 0.5). To sum up, our results suggest that the dietary RPB supplementation could affect the ileal SCFA concentration by modulating the microbial community and regulating metabolism, thereby contributing to ileal development and barrier function. This study offers new evidence supporting the use of RPB as a potential application for Tibetan sheep.

本试验旨在探讨饲粮中添加保护瘤胃甜菜碱(RPB)对藏羊回肠发育和功能的影响。选用60只2月龄雄性羔羊(17.72±0.19 kg),随机分为对照组(Ctrl)和RPB组(0.08% Bet)。预试期为10 d,正试期为90 d。结果表明,饲粮中添加RPB显著提高了绒毛高度、绒毛高度/隐窝深度(VH/CD)比和总抗氧化能力(T-AOC) (P < 0.05),显著降低丙二醛(MDA)、脂多糖(LPS)和肿瘤坏死因子-α (TNF-α) (P < 0.05),并改变了短链脂肪酸(SCFAs)的组成。重要的是,回肠屏障相关基因(Claudin-1)表达升高(P < 0.05)。微生物学分析表明,添加RPB可提高无纤弧菌和双歧杆菌的相对丰度。几种差异代谢物,包括Cer 18:1;20 /18:0, Cer 18:1;RPB组2O/24:2和(±)13-HpODE显著升高(P < 0.05)。VH/CD与双歧杆菌呈显著正相关,Cer为18:1;20 /18:0, Cer 18:1;2O/24:2和(±)13-HpODE (r > 0.5)。综上所述,饲粮中添加RPB可能通过调节微生物群落和调节代谢来影响回肠SCFA浓度,从而促进回肠发育和屏障功能。本研究为RPB在藏羊上的潜在应用提供了新的证据。
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引用次数: 0
Nano-chitosan modified restorative materials suppress Streptococcus mutans biofilm and virulence gene expression. 纳米壳聚糖修饰修复材料对变形链球菌生物膜及毒力基因表达的抑制作用。
IF 3.7 3区 生物学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2026-02-03 DOI: 10.1186/s13568-025-02004-2
Jakline N Saddik, Martha M Naguib, Labib M Labib, Ahmed O El-Gendy, Fatma Molham
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引用次数: 0
Microbial succession and machine learning for postmortem interval estimation in bromadiolone-poisoned cadavers. 微生物演替和机器学习在溴代龙中毒尸体的死后间隔估计。
IF 3.7 3区 生物学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2026-02-03 DOI: 10.1186/s13568-026-02023-7
Lipin Ren, Zhongjiang Wang, Zeyu Yang, Renmao Tian, Jinliang Du, Zhen Dang, Jianxia Li, Xinrui Guo, Yang Xia, Wen Cui, Yequan Wang
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引用次数: 0
Agaricus arvensis extract-coated functionalized silver nanoparticles for effective aerobic biotransformation of synthetic L-tyrosine to L-DOPA. 松茸提取物包被功能化纳米银用于合成l -酪氨酸到L-DOPA的有效有氧生物转化。
IF 3.7 3区 生物学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2026-02-01 DOI: 10.1186/s13568-026-02013-9
Yan Li, Sikander Ali, Qaiser Farid Khan, Muhammad Usman Ahmad, Laraib Fatima, Tawaf Ali Shah, Molalign Assefa, Ahmed Al-Emam

This study presents a green nanobiotechnological platform for enhanced L-DOPA biosynthesis. Intracellular tyrosine hydroxylase (TH) was immobilized onto silver nanoparticles (AgNPs) biosynthesized using extract of the edible mushroom Agaricus arvensis and subsequently applied for the aerobic biotransformation of synthetic L-tyrosine. The AgNPs were produced using the mushroom extract as a natural reducing agent and optimized for "TH" activity under controlled conditions: 2.5% (w/v) biomass concentration, peptone-saline medium, 90 °C, and 24 min reaction time. Various analytical techniques such as UV-Vis spectroscopy, SEM, FTIR and XRD were used to confirm the synthesis and characterization of the AgNPs. The particle size was further validated by Scanning Electron Microscopy (SEM), revealing an average size of 88.49 ± 3.83 nm. The particle size was further analyzed by a Zeta-sizer, which showed a Z-average size of 163.7 d.nm. When applied in the biotransformation of synthetic L-tyrosine, the AgNP-immobilized enzyme significantly outperformed the free enzyme, yielding a 2.54-fold increase in L-DOPA production within 1.5 h. These results indicate that Agaricus arvensis-derived AgNPs not only stabilize the enzyme but also boost its activity, providing a sustainable and efficient approach for producing L-DOPA. This method holds promise for large-scale applications in pharmaceutical manufacturing.

本研究提出了一种绿色纳米技术平台,用于增强左旋多巴的生物合成。将细胞内酪氨酸羟化酶(TH)固定在以食用菌Agaricus arvensis提取物为原料合成的银纳米颗粒(AgNPs)上,并应用于合成的l -酪氨酸的有氧生物转化。以蘑菇提取物为天然还原剂制备AgNPs,并在2.5% (w/v)生物质浓度、蛋白胨-盐水培养基、90°C、24 min反应时间的控制条件下优化“TH”活性。利用紫外可见光谱、扫描电镜、红外光谱和x射线衍射等分析技术对AgNPs的合成和表征进行了验证。通过扫描电镜(SEM)进一步验证了其粒径,平均粒径为88.49±3.83 nm。进一步用zeta粒度仪对其粒度进行分析,z -平均粒径为163.7 d.m m。将agnp固定化酶应用于合成l -酪氨酸的生物转化时,其性能明显优于游离酶,在1.5 h内L-DOPA的产量提高了2.54倍。这表明,agnp不仅稳定了agnp酶,而且提高了agnp酶的活性,为L-DOPA的生产提供了一种可持续、高效的途径。这种方法有望在制药生产中大规模应用。
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引用次数: 0
Enzymatic preparation of epigallocatechin gallate diglucoside and bioactivity assessment. 表没食子儿茶素没食子酸二糖苷的酶法制备及生物活性评价。
IF 3.7 3区 生物学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2026-02-01 DOI: 10.1186/s13568-026-02014-8
Bohan Yang, Nianqing Zhu, Yuancheng Huang, Jianming Deng, Min Yu, Xiaodong Yan, Jing Wang

Epigallocatechin gallate (EGCG), the predominant catechin in green tea, has limited application due to its poor water solubility and instability. To address these issues, this study utilized recombinant sucrose phosphorylase to catalyze the glucosylation of EGCG, successfully synthesizing (-)-epigallocatechin gallate 4',4″-O-α-D-diglucopyranoside (EGCG-2G). The process was optimized using response surface methodology, achieving a 97.46% conversion rate of EGCG. EGCG-2G was purified to ≥ 99% purity by semi-preparative liquid chromatography. It exhibited approximately 124-fold higher water solubility than EGCG and demonstrated significantly enhanced stability under thermal and acidic conditions (50 °C, pH = 5), with an 84.82% and 35.36% improvement over EGCG and commercial (-)-epigallocatechin-3-gallate-4'-O-α-D-glucoside (EGCG-1G), respectively. Furthermore, EGCG-2G displayed notable antioxidant, anti-inflammatory, and anti-melanogenic activities. It effectively scavenged intracellular and extracellular free radicals, reduced inflammatory cytokine levels, and inhibited melanin synthesis. Molecular docking and gene expression analyses suggested that its anti-melanogenic effect might be associated with the MC1R/cAMP/MITF signaling pathway.

表没食子儿茶素没食子酸酯(EGCG)是绿茶中主要的儿茶素,由于其水溶性差和不稳定性,应用有限。针对这些问题,本研究利用重组蔗糖磷酸化酶催化EGCG的糖基化,成功合成(-)-表没食子儿茶素没食子酸酯4′,4″- o -α- d -二lucopyranoside (EGCG- 2g)。采用响应面法对工艺进行优化,EGCG转化率为97.46%。经半制备液相色谱法纯化,纯度≥99%。它的水溶性比EGCG高约124倍,并且在热和酸性条件下(50°C, pH = 5)的稳定性显著增强,分别比EGCG和(-)-表没食子儿茶素-3-没食子酸-4′- o -α- d -葡萄糖苷(EGCG- 1g)提高84.82%和35.36%。此外,EGCG-2G具有显著的抗氧化、抗炎和抗黑素生成活性。有效清除细胞内外自由基,降低炎性细胞因子水平,抑制黑色素合成。分子对接和基因表达分析提示其抗黑素生成作用可能与MC1R/cAMP/MITF信号通路有关。
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引用次数: 0
Correction: An effective method to enhance transient gene expression by transfecting high-density CHO cells. 更正:通过转染高密度CHO细胞提高瞬时基因表达的有效方法。
IF 3.7 3区 生物学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2026-01-30 DOI: 10.1186/s13568-026-02010-y
Yu-Shun Fu, Xue-Lian Han, Wei-Dong Li, Lin-Lin Shan, Shao-Lei Geng, Chun-Liu Mi, Wei-Hua Dong, Tian-Yun Wang, Xiao-Yin Wang
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引用次数: 0
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AMB Express
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