{"title":"Developments in extremophilic bacterial genomics: A post next generation sequencing era","authors":"Digvijay Verma , Swati Joshi , Priyanka Ghimire , Archana Mishra , Vinay Kumar","doi":"10.1016/j.egg.2024.100255","DOIUrl":null,"url":null,"abstract":"<div><p>Advancements in sequencing technology, especially the emergence of next-generation sequencing (NGS), have immensely revolutionized the search for extremophilic microorganisms. The complementation of metagenomics and next-generation sequencing tools provides an unprecedented opportunity to explore hidden information about microbial diversity in extreme environments. NGS techniques allow us to understand the genomics, physiology, and evolution of extremophiles. Whole-genome/metagenome-based sequencing has revealed several mysteries of extremophiles that have enhanced our understanding of the evolution of extremophilic microbes. The present article attempts to provide extensive information on bacterial type extremophiles in the context of advanced NGS platforms.</p></div>","PeriodicalId":37938,"journal":{"name":"Ecological Genetics and Genomics","volume":"32 ","pages":"Article 100255"},"PeriodicalIF":0.0000,"publicationDate":"2024-04-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Ecological Genetics and Genomics","FirstCategoryId":"1085","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S2405985424000399","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"Agricultural and Biological Sciences","Score":null,"Total":0}
引用次数: 0
Abstract
Advancements in sequencing technology, especially the emergence of next-generation sequencing (NGS), have immensely revolutionized the search for extremophilic microorganisms. The complementation of metagenomics and next-generation sequencing tools provides an unprecedented opportunity to explore hidden information about microbial diversity in extreme environments. NGS techniques allow us to understand the genomics, physiology, and evolution of extremophiles. Whole-genome/metagenome-based sequencing has revealed several mysteries of extremophiles that have enhanced our understanding of the evolution of extremophilic microbes. The present article attempts to provide extensive information on bacterial type extremophiles in the context of advanced NGS platforms.
期刊介绍:
Ecological Genetics and Genomics publishes ecological studies of broad interest that provide significant insight into ecological interactions or/ and species diversification. New data in these areas are published as research papers, or methods and resource reports that provide novel information on technologies or tools that will be of interest to a broad readership. Complete data sets are shared where appropriate. The journal also provides Reviews, and Perspectives articles, which present commentary on the latest advances published both here and elsewhere, placing such progress in its broader biological context. Topics include: -metagenomics -population genetics/genomics -evolutionary ecology -conservation and molecular adaptation -speciation genetics -environmental and marine genomics -ecological simulation -genomic divergence of organisms