Dual-branch transfer learning in Raman spectroscopy for bacterial quantitative analysis

IF 2.7 3区 化学 Q2 CHEMISTRY, ANALYTICAL Vibrational Spectroscopy Pub Date : 2024-05-29 DOI:10.1016/j.vibspec.2024.103695
Qifeng Li , Yunpeng Yang , Jianing Wu , Chunsheng Wei , Hua Xia , Yangguang Han , Yinguo Huang , Xiangyun Ma
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Abstract

Accurate quantification of bacteria is critical for ensuring food safety, advancing biomedical research, and a range of other pressing concerns. Raman spectroscopy is a popular technique for quantitative analysis due to its benefits of being fast, non-destructive, and highly sensitive. However, the accuracy of the transfer model is often limited by factors such as differences in equipment and environmental noise, which limits the popularization of Raman spectroscopy. In this paper, we propose an approach that overcomes this challenge by introducing a dual branch network based on Continuous Wavelet Transform (CWT) for model transfer. Our model comprises dual branches that perform distinct tasks. The spectral learning branch is responsible for extracting features from the spectral domain. The time-frequency map learning branch employs CNNs for extracting the multi-scale information-rich features. The proposed method is used for the quantitative analysis of Escherichia coli. The proposed approach significantly outperforms traditional methods in improving prediction accuracy. It offers a much-needed solution to the long-standing challenge of Raman spectroscopy in the field of bacterial quantitative analysis. With our approach, we can expect to see Raman spectroscopy more widely adopted in the future.

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用于细菌定量分析的拉曼光谱双分支迁移学习
细菌的精确定量对于确保食品安全、促进生物医学研究以及其他一系列紧迫问题都至关重要。拉曼光谱具有快速、无损和高灵敏度等优点,是一种常用的定量分析技术。然而,转移模型的准确性往往受到设备差异和环境噪声等因素的限制,从而限制了拉曼光谱的普及。在本文中,我们提出了一种方法,通过引入基于连续小波变换(CWT)的双分支网络进行模型转移来克服这一挑战。我们的模型由执行不同任务的双分支组成。频谱学习分支负责从频谱域提取特征。时频图学习分支采用 CNN 提取多尺度信息丰富的特征。所提出的方法被用于大肠杆菌的定量分析。在提高预测准确性方面,所提出的方法明显优于传统方法。它为拉曼光谱在细菌定量分析领域长期面临的挑战提供了一个亟需的解决方案。有了我们的方法,拉曼光谱有望在未来得到更广泛的应用。
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来源期刊
Vibrational Spectroscopy
Vibrational Spectroscopy 化学-分析化学
CiteScore
4.70
自引率
4.00%
发文量
103
审稿时长
52 days
期刊介绍: Vibrational Spectroscopy provides a vehicle for the publication of original research that focuses on vibrational spectroscopy. This covers infrared, near-infrared and Raman spectroscopies and publishes papers dealing with developments in applications, theory, techniques and instrumentation. The topics covered by the journal include: Sampling techniques, Vibrational spectroscopy coupled with separation techniques, Instrumentation (Fourier transform, conventional and laser based), Data manipulation, Spectra-structure correlation and group frequencies. The application areas covered include: Analytical chemistry, Bio-organic and bio-inorganic chemistry, Organic chemistry, Inorganic chemistry, Catalysis, Environmental science, Industrial chemistry, Materials science, Physical chemistry, Polymer science, Process control, Specialized problem solving.
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