Towards more precise automatic analysis: a systematic review of deep learning-based multi-organ segmentation.

IF 2.9 4区 医学 Q3 ENGINEERING, BIOMEDICAL BioMedical Engineering OnLine Pub Date : 2024-06-08 DOI:10.1186/s12938-024-01238-8
Xiaoyu Liu, Linhao Qu, Ziyue Xie, Jiayue Zhao, Yonghong Shi, Zhijian Song
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Abstract

Accurate segmentation of multiple organs in the head, neck, chest, and abdomen from medical images is an essential step in computer-aided diagnosis, surgical navigation, and radiation therapy. In the past few years, with a data-driven feature extraction approach and end-to-end training, automatic deep learning-based multi-organ segmentation methods have far outperformed traditional methods and become a new research topic. This review systematically summarizes the latest research in this field. We searched Google Scholar for papers published from January 1, 2016 to December 31, 2023, using keywords "multi-organ segmentation" and "deep learning", resulting in 327 papers. We followed the PRISMA guidelines for paper selection, and 195 studies were deemed to be within the scope of this review. We summarized the two main aspects involved in multi-organ segmentation: datasets and methods. Regarding datasets, we provided an overview of existing public datasets and conducted an in-depth analysis. Concerning methods, we categorized existing approaches into three major classes: fully supervised, weakly supervised and semi-supervised, based on whether they require complete label information. We summarized the achievements of these methods in terms of segmentation accuracy. In the discussion and conclusion section, we outlined and summarized the current trends in multi-organ segmentation.

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实现更精确的自动分析:基于深度学习的多器官分割系统回顾。
从医学图像中准确分割头颈部、胸部和腹部的多个器官是计算机辅助诊断、手术导航和放射治疗的重要步骤。在过去几年中,通过数据驱动的特征提取方法和端到端的训练,基于深度学习的自动多器官分割方法的性能远远超过了传统方法,成为一个新的研究课题。本综述系统地总结了这一领域的最新研究。我们使用关键词 "多器官分割 "和 "深度学习 "检索了谷歌学术从 2016 年 1 月 1 日至 2023 年 12 月 31 日发表的论文,共检索到 327 篇论文。我们遵循 PRISMA 指南进行论文筛选,有 195 项研究被认为属于本综述的研究范围。我们总结了多器官分割涉及的两个主要方面:数据集和方法。关于数据集,我们概述了现有的公共数据集,并进行了深入分析。关于方法,我们根据是否需要完整的标签信息,将现有方法分为三大类:完全监督、弱监督和半监督。我们总结了这些方法在分割准确性方面取得的成就。在讨论和结论部分,我们概述并总结了当前多器官分割的发展趋势。
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来源期刊
BioMedical Engineering OnLine
BioMedical Engineering OnLine 工程技术-工程:生物医学
CiteScore
6.70
自引率
2.60%
发文量
79
审稿时长
1 months
期刊介绍: BioMedical Engineering OnLine is an open access, peer-reviewed journal that is dedicated to publishing research in all areas of biomedical engineering. BioMedical Engineering OnLine is aimed at readers and authors throughout the world, with an interest in using tools of the physical and data sciences and techniques in engineering to understand and solve problems in the biological and medical sciences. Topical areas include, but are not limited to: Bioinformatics- Bioinstrumentation- Biomechanics- Biomedical Devices & Instrumentation- Biomedical Signal Processing- Healthcare Information Systems- Human Dynamics- Neural Engineering- Rehabilitation Engineering- Biomaterials- Biomedical Imaging & Image Processing- BioMEMS and On-Chip Devices- Bio-Micro/Nano Technologies- Biomolecular Engineering- Biosensors- Cardiovascular Systems Engineering- Cellular Engineering- Clinical Engineering- Computational Biology- Drug Delivery Technologies- Modeling Methodologies- Nanomaterials and Nanotechnology in Biomedicine- Respiratory Systems Engineering- Robotics in Medicine- Systems and Synthetic Biology- Systems Biology- Telemedicine/Smartphone Applications in Medicine- Therapeutic Systems, Devices and Technologies- Tissue Engineering
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