Luciferase reporter assay for NF-kB activation automated by an open-source liquid handling platform

IF 3.7 4区 医学 Q3 BIOCHEMICAL RESEARCH METHODS SLAS Technology Pub Date : 2024-06-05 DOI:10.1016/j.slast.2024.100155
Boren Lin, Kinnari Watson
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Abstract

A luciferase reporter assay is a cell-based, enzymatic experiment that utilizes an ectopically expressed luciferase in cultured cells or in live animals, with the presence of its substrate luciferin, to generate luminescence in response to gene regulation at the level of transcription. This assay can be easily formatted for high-throughput sample analysis. The reagents are commercially available and routinely used in various applications. We have automated a luciferase reporter assay on the Opentrons OT-2 platform to measure activation of NF-kB in HeLa cells. The Python script-based protocols were developed to perform cell seeding, reporter construct transfection, and enzyme-catalytic reaction to produce detectable signals for quantification with desirable quality of sample handling and minimal hands-on time.

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利用开源液体处理平台自动进行 NF-kB 激活的荧光素酶报告分析
荧光素酶报告分析是一种基于细胞的酶促实验,它利用在培养细胞或活体动物中异位表达的荧光素酶,在其底物荧光素存在的情况下,根据转录水平的基因调控产生发光。这种检测方法易于格式化,可用于高通量样本分析。试剂可在市场上买到,并已在各种应用中常规使用。我们在 Opentrons OT-2 平台上自动进行了荧光素酶报告分析,以测量 HeLa 细胞中 NF-kB 的激活情况。我们开发了基于 Python 脚本的协议,用于执行细胞播种、报告构建体转染和酶催化反应,以产生可检测的定量信号,同时实现理想的样品处理质量和最少的动手时间。
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来源期刊
SLAS Technology
SLAS Technology Computer Science-Computer Science Applications
CiteScore
6.30
自引率
7.40%
发文量
47
审稿时长
106 days
期刊介绍: SLAS Technology emphasizes scientific and technical advances that enable and improve life sciences research and development; drug-delivery; diagnostics; biomedical and molecular imaging; and personalized and precision medicine. This includes high-throughput and other laboratory automation technologies; micro/nanotechnologies; analytical, separation and quantitative techniques; synthetic chemistry and biology; informatics (data analysis, statistics, bio, genomic and chemoinformatics); and more.
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