Identifying therapeutic target genes for migraine by systematic druggable genome-wide Mendelian randomization.

IF 7.3 1区 医学 Q1 CLINICAL NEUROLOGY Journal of Headache and Pain Pub Date : 2024-06-12 DOI:10.1186/s10194-024-01805-3
Chengcheng Zhang, Yiwei He, Lu Liu
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Abstract

Background: Currently, the treatment and prevention of migraine remain highly challenging. Mendelian randomization (MR) has been widely used to explore novel therapeutic targets. Therefore, we performed a systematic druggable genome-wide MR to explore the potential therapeutic targets for migraine.

Methods: We obtained data on druggable genes and screened for genes within brain expression quantitative trait locis (eQTLs) and blood eQTLs, which were then subjected to two-sample MR analysis and colocalization analysis with migraine genome-wide association studies data to identify genes highly associated with migraine. In addition, phenome-wide research, enrichment analysis, protein network construction, drug prediction, and molecular docking were performed to provide valuable guidance for the development of more effective and targeted therapeutic drugs.

Results: We identified 21 druggable genes significantly associated with migraine (BRPF3, CBFB, CDK4, CHD4, DDIT4, EP300, EPHA5, FGFRL1, FXN, HMGCR, HVCN1, KCNK5, MRGPRE, NLGN2, NR1D1, PLXNB1, TGFB1, TGFB3, THRA, TLN1 and TP53), two of which were significant in both blood and brain (HMGCR and TGFB3). The results of phenome-wide research showed that HMGCR was highly correlated with low-density lipoprotein, and TGFB3 was primarily associated with insulin-like growth factor 1 levels.

Conclusions: This study utilized MR and colocalization analysis to identify 21 potential drug targets for migraine, two of which were significant in both blood and brain. These findings provide promising leads for more effective migraine treatments, potentially reducing drug development costs.

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通过系统性的全基因组孟德尔随机化确定偏头痛的治疗靶基因。
背景:目前,偏头痛的治疗和预防仍然极具挑战性。孟德尔随机化(MR)已被广泛用于探索新的治疗靶点。因此,我们进行了一项系统的可药用全基因组MR研究,以探索偏头痛的潜在治疗靶点:我们获得了可药用基因的数据,并筛选了脑表达定量性状位点(eQTLs)和血液eQTLs内的基因,然后对这些基因进行了双样本MR分析,并与偏头痛全基因组关联研究数据进行了共定位分析,以确定与偏头痛高度相关的基因。此外,还进行了全表型研究、富集分析、蛋白质网络构建、药物预测和分子对接,为开发更有效、更有针对性的治疗药物提供了有价值的指导:结果:我们发现了21个与偏头痛显著相关的可药用基因(BRPF3、CBFB、CDK4、CHD4、DDIT4、EP300、EPHA5、FGFRL1、FXN、HMGCR、HVCN1、KCNK5、MRGPRE、NLGN2、NR1D1、PLXNB1、TGFB1、TGFB3、THRA、TLN1和TP53),其中两个基因在血液和大脑中均显著相关(HMGCR和TGFB3)。全表型研究结果显示,HMGCR与低密度脂蛋白高度相关,而TGFB3主要与胰岛素样生长因子1水平相关:本研究利用磁共振和共定位分析确定了 21 个治疗偏头痛的潜在药物靶点,其中两个靶点在血液和大脑中均有重要作用。这些发现为更有效的偏头痛治疗提供了有希望的线索,有可能降低药物开发成本。
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来源期刊
Journal of Headache and Pain
Journal of Headache and Pain 医学-临床神经学
CiteScore
11.80
自引率
13.50%
发文量
143
审稿时长
6-12 weeks
期刊介绍: The Journal of Headache and Pain, a peer-reviewed open-access journal published under the BMC brand, a part of Springer Nature, is dedicated to researchers engaged in all facets of headache and related pain syndromes. It encompasses epidemiology, public health, basic science, translational medicine, clinical trials, and real-world data. With a multidisciplinary approach, The Journal of Headache and Pain addresses headache medicine and related pain syndromes across all medical disciplines. It particularly encourages submissions in clinical, translational, and basic science fields, focusing on pain management, genetics, neurology, and internal medicine. The journal publishes research articles, reviews, letters to the Editor, as well as consensus articles and guidelines, aimed at promoting best practices in managing patients with headaches and related pain.
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