Evaluating the contribution of plant metabolic pathways in the light to the ATP:NADPH demand using a meta-analysis of isotopically non-stationary metabolic flux analyses.

IF 2.9 3区 生物学 Q2 PLANT SCIENCES Photosynthesis Research Pub Date : 2024-09-01 Epub Date: 2024-06-14 DOI:10.1007/s11120-024-01106-5
Kaila Smith, Deserah D Strand, Berkley J Walker
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Abstract

Balancing the ATP: NADPH demand from plant metabolism with supply from photosynthesis is essential for preventing photodamage and operating efficiently, so understanding its drivers is important for integrating metabolism with the light reactions of photosynthesis and for bioengineering efforts that may radically change this demand. It is often assumed that the C3 cycle and photorespiration consume the largest amount of ATP and reductant in illuminated leaves and as a result mostly determine the ATP: NADPH demand. However, the quantitative extent to which other energy consuming metabolic processes contribute in large ways to overall ATP: NADPH demand remains unknown. Here, we used the metabolic flux networks of numerous recently published isotopically non-stationary metabolic flux analyses (INST-MFA) to evaluate flux through the C3 cycle, photorespiration, the oxidative pentose phosphate pathway, the tricarboxylic acid cycle, and starch/sucrose synthesis and characterize broad trends in the demand of energy across different pathways and compartments as well as in the overall ATP:NADPH demand. These data sets include a variety of species including Arabidopsis thaliana, Nicotiana tabacum, and Camelina sativa as well as varying environmental factors including high/low light, day length, and photorespiratory levels. Examining these datasets in aggregate reveals that ultimately the bulk of the energy flux occurred in the C3 cycle and photorespiration, however, the energy demand from these pathways did not determine the ATP: NADPH demand alone. Instead, a notable contribution was revealed from starch and sucrose synthesis which might counterbalance photorespiratory demand and result in fewer adjustments in mechanisms which balance the ATP deficit.

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利用同位素非稳态代谢通量分析的元分析,评估植物代谢途径在光照下对 ATP:NADPH 需求的贡献。
平衡 ATP:植物新陈代谢对 NADPH 的需求与光合作用对 NADPH 的供应对于防止光损伤和高效运作至关重要,因此,了解其驱动因素对于将新陈代谢与光合作用的光反应结合起来,以及对于可能从根本上改变这种需求的生物工程工作都很重要。人们通常认为,C3 循环和光呼吸在光照下的叶片中消耗的 ATP 和还原剂最多,因此主要决定了 ATP 和 NADPH 的需求量:NADPH 需求量。然而,其他能量消耗代谢过程对整个 ATP:NADPH 需求量的量化程度仍然未知。在这里,我们利用最近发表的大量同位素非稳态代谢通量分析(INST-MFA)的代谢通量网络,评估了通过 C3 循环、光呼吸、磷酸戊糖氧化途径、三羧酸循环和淀粉/蔗糖合成的通量,并描述了不同途径和区系的能量需求以及 ATP:NADPH 总需求的广泛趋势。这些数据集包括拟南芥、烟草和荠菜等多种物种以及不同的环境因素,包括强光/弱光、日照长度和光呼吸水平。对这些数据集进行综合研究后发现,最终大部分的能量通量发生在 C3 循环和光呼吸中,但是这些途径的能量需求并不能单独决定 ATP:NADPH 需求量。相反,淀粉和蔗糖合成的贡献显著,可能抵消了光呼吸的需求,导致平衡 ATP 缺口的机制调整较少。
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来源期刊
Photosynthesis Research
Photosynthesis Research 生物-植物科学
CiteScore
6.90
自引率
8.10%
发文量
91
审稿时长
4.5 months
期刊介绍: Photosynthesis Research is an international journal open to papers of merit dealing with both basic and applied aspects of photosynthesis. It covers all aspects of photosynthesis research, including, but not limited to, light absorption and emission, excitation energy transfer, primary photochemistry, model systems, membrane components, protein complexes, electron transport, photophosphorylation, carbon assimilation, regulatory phenomena, molecular biology, environmental and ecological aspects, photorespiration, and bacterial and algal photosynthesis.
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