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Structural insights into a PSI-ACPI supercomplex from a cryptophyte alga Chroomonas placoidea. 从一种隐生藻类斑点单胞菌中获得PSI-ACPI超复合体的结构见解。
IF 3.7 3区 生物学 Q2 PLANT SCIENCES Pub Date : 2025-12-20 DOI: 10.1007/s11120-025-01191-0
Xingyue Li, Zhiyuan Mao, Zhenhua Li, Liangliang Shen, Xiaoyi Li, Yanyan Yang, Wenda Wang, Tingyun Kuang, Jian-Ren Shen, Guangye Han
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引用次数: 0
The commonly used electron donor 2,6-dichlorophenolindophenol also serves as an efficient electron acceptor for Photosystem I. 通常使用的电子供体2,6-二氯酚吲哚酚也作为光系统I的有效电子受体。
IF 3.7 3区 生物学 Q2 PLANT SCIENCES Pub Date : 2025-12-18 DOI: 10.1007/s11120-025-01190-1
Anastasia A Petrova, Georgy E Milanovsky, Ilya A Volkhin, Marina A Kozuleva, Dmitry A Cherepanov, Alexey Yu Semenov
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引用次数: 0
New chlorophylls designed by theoretical spectroscopy and machine learning. 通过理论光谱学和机器学习设计的新叶绿素。
IF 3.7 3区 生物学 Q2 PLANT SCIENCES Pub Date : 2025-12-11 DOI: 10.1007/s11120-025-01183-0
Fabian Weber, Simon Petry, Dennis J Nürnberg, Jan P Götze
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引用次数: 0
Stomatal conductance dominates the limitation of photosynthetic induction across leaf developmental stages in foxglove. 毛地黄叶片发育阶段气孔导度对光合诱导的限制起主导作用。
IF 3.7 3区 生物学 Q2 PLANT SCIENCES Pub Date : 2025-12-10 DOI: 10.1007/s11120-025-01189-8
Qin Zhang, Yunmin Wei, Lihong Tan, Haifeng Xiong, Xiaohong Xiang
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引用次数: 0
The structure of phycobilisome with a bicylindrical core from the cyanobacterium Synechococcus elongatus PCC 7942. 蓝藻长聚球菌PCC 7942的双圆柱形核藻胆酶体结构。
IF 3.7 3区 生物学 Q2 PLANT SCIENCES Pub Date : 2025-12-08 DOI: 10.1007/s11120-025-01186-x
Zhenggao Zheng, Chengying Ma, Hongrui Wang, Guopeng Wang, Chunxia Dong, Ning Gao, Jindong Zhao

Phycobilisomes (PBSs) are the major light-harvesting complexes in the cyanobacteria and red algae and they consist of a central core and peripheral rods that are attached to the core. The PBS cores contain 2-5 allophycocyanin cylinders that are organized by ApcE. At the present, structures of PBS with tricylindrical and pentacylindrical cores have been determined while the structure of the PBS with a bicylindrical core is yet to be revealed. Here we report the cryo-EM structure of PBS with bicylindrical core from Synechococcus elongatus PCC 7942 (Synechococcus 7942) at an overall resolution of approximately 3 Å. Similar to the PBS with a tricylindrical core, six peripheral rods are attached to the core by the rod-core linker protein CpcG in the PBS of Synechococcus 7942 even though the core lacks the top AP cylinder, which is important for the attachment of peripheral rods to the tricylindrical cores. We found that the C-terminus of ApcE in the Synechococcus 7942 was involved in interacting with both CpcG and CpcB of a top peripheral rod, compensating for the absence of the top AP cylinder of the core and maintaining PBS stability. Analysis of the bilin distribution reveals that distance of excitation energy transfer from top peripheral rods to the terminal emitters is approximately 15% shorter compared to the PBS with tricylindrical cores. Although there are 30% fewer bilin chromophores in the Synechococcus 7942 PBS core compared with the tricylindrical core, the aromatic residue ring in the Synechococcus 7942 PBS core is conserved, supporting the suggestion that these aromatic residues from AP and linker proteins are critical to the energy transfer of PBS.

藻胆异构体(PBSs)是蓝藻和红藻中主要的光收集复合物,它们由一个中心核心和附着在核心上的外周棒组成。PBS芯含有2-5个异藻蓝蛋白圆柱体,由ApcE组织。目前,具有三圆柱形和五圆柱形核芯的PBS结构已经确定,而具有双圆柱形核芯的PBS结构尚未揭示。本文报道了长聚球菌PCC 7942(聚球菌7942)双圆柱核PBS的低温电镜结构,总分辨率约为3 Å。与具有三圆柱形核心的PBS类似,在聚球菌7942的PBS中,六个外周棒通过棒核连接蛋白CpcG附着在核心上,尽管核心缺乏顶部AP圆柱体,这对于外周棒附着在三圆柱形核心上很重要。我们发现,在聚球菌7942中,ApcE的c端参与了与顶部外周棒的CpcG和CpcB的相互作用,弥补了核心顶部AP柱体的缺失,并维持了PBS的稳定性。对十亿素分布的分析表明,与具有三圆柱形芯的PBS相比,激发能从顶部周边棒到终端发射器的传递距离缩短了约15%。虽然在聚球菌7942 PBS核中与三圆柱形核相比,十亿蛋白发色团减少了30%,但聚球菌7942 PBS核中的芳香残基环是保守的,这支持了这些来自AP和连接蛋白的芳香残基对PBS的能量传递至关重要的建议。
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引用次数: 0
Photosystem I: towards stable photovoltage generation in a semi-artificial system. 光系统I:在半人工系统中产生稳定的光电压。
IF 3.7 3区 生物学 Q2 PLANT SCIENCES Pub Date : 2025-12-02 DOI: 10.1007/s11120-025-01188-9
Mahir Mamedov, Liya Vitukhnovskaya, Andrey Zaspa, Aida Mamedova, Alexey Semenov

The generation of voltage (ΔV) by purified photosynthetic protein-pigment complex of photosystem I (PS I) from the cyanobacterium Synechocystis sp. PCC 6803 immobilized onto a porous Millipore nitrocellulose membrane filter (MF) and contacting with indium tin oxide (ITO) semiconductor glass slides, termed ITO|PS I - MF|ITO have been directly measured. In the presence of the ascorbate/2,6-dichlorophenolindophenol redox couple and disaccharide trehalose, photoinduced generation of ΔV with a maximum amplitude was observed upon light irradiation for more than 1 h. After storing the ITO|PS I - MF|ITO system in a desiccator at 22 ± 1 °C and ~ 65% relative humidity for 7 days in the dark, the photovoltage amplitude decreased by ~ 15%. A significant drop in the ΔV amplitude was observed on the 14th day of storage under these conditions. The amplitude of the stable ΔV signal was fully restored after re-injecting fresh buffer directly into the system, although maximum amplitude was reached more slowly. It is clear that longer preservation of PS I functional activity during storage of the system can be achieved at a higher relative humidity in the desiccator, since the photovoltage was completely suppressed within 24 h when the system was stored in the dark in the laboratory room. The protective role of trehalose is also discussed.

本文直接测定了蓝细菌Synechocystis sp. PCC 6803光系统I (PS I)纯化的光合蛋白-色素复合物(PS I)固定在多孔微孔硝化纤维素膜过滤器(MF)上,与氧化铟锡(ITO)半导体玻片(ITO |PS I - MF|ITO)接触后产生的电压(ΔV)。在抗坏血酸/2,6-二氯酚吲哚酚氧化还原偶对和双糖海藻糖存在的情况下,光照超过1小时后,观察到ΔV光诱导产生的最大振幅。将ITO|PS I - MF|ITO体系在22±1°C和~ 65%相对湿度的干燥器中在黑暗中储存7天后,光电压振幅下降了~ 15%。在这些条件下的第14天,ΔV振幅显著下降。将新的缓冲液直接注入系统后,稳定的ΔV信号的振幅完全恢复,但达到最大振幅的速度较慢。显然,在干燥器中较高的相对湿度下,可以在系统存储期间更长的保存PS I功能活性,因为当系统在实验室室内黑暗中存储时,光电压在24小时内被完全抑制。还讨论了海藻糖的保护作用。
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引用次数: 0
Calculation of specificity constants Γ for RUBISCO of different species from microcalorimetric data. 从微量热数据计算不同种类RUBISCO的特异性常数Γ。
IF 3.7 3区 生物学 Q2 PLANT SCIENCES Pub Date : 2025-12-01 DOI: 10.1007/s11120-025-01187-w
Joachim Frank, Frank Müh

Based on earlier data concerning the reaction enthalpy [Formula: see text] of Ribulose 1,5-bisphosphate carboxylase/oxygenase (RUBISCO) from spinach (Frank et al. Phys Chem Chem Phys 2:1301-1304, 2000), it is shown that the specificity constant [Formula: see text], indicating the ability of RUBISCO to discriminate between CO2 and O2 as substrate, can be determined from an isothermal titration calorimetric (ITC) measurement of [Formula: see text] as a function of the substrate concentration ratio [Formula: see text]. The approach does not need any radioactive materials and might be a cost-effective alternative for RUBISCO engineering to screen for variants with a high specificity constant.

基于早期关于菠菜中1,5-二磷酸核酮糖羧化酶/加氧酶(RUBISCO)的反应焓的数据[公式:见文本](Frank等人)。Phys Chem Chem Phys 2:1301-1304, 2000),表明RUBISCO区分CO2和O2作为底物的能力的特异性常数[公式:见文]可以通过等温滴定量热(ITC)测量[公式:见文]作为底物浓度比[公式:见文]的函数来确定。该方法不需要任何放射性物质,可能是RUBISCO工程筛选具有高特异性常数的变体的成本效益替代方法。
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引用次数: 0
Excitation energy transfer and trapping in Photosystem I of the green alga Bryopsis corticulans. 绿藻球囊苔藓光系统I的激发能传递和捕获。
IF 3.7 3区 生物学 Q2 PLANT SCIENCES Pub Date : 2025-11-24 DOI: 10.1007/s11120-025-01181-2
Parveen Akhtar, Wenda Wang, Sumit Singhal, Ferenc Sarlós, Jian-Ren Shen, Petar H Lambrev

Photosystem I (PSI) from the siphonous green alga Bryopsis corticulans carries ten subunits of Light-Harvesting Complex I (LHCI) that enlarge its absorption cross-section yet must still deliver excitations rapidly to the P700 reaction center. Here we investigate the light-harvesting function of PSI-LHCI, the excitation energy transfer within the supercomplex and how it affects the overall photochemical trapping lifetime. We performed picosecond time-resolved fluorescence spectroscopy at room temperature and 77 K and femtosecond transient absorption spectroscopy on purified PSI-LHCI supercomplex. Ultrafast spectroscopy showed that spectral equilibration in the antenna occurs mainly in the first 1 ps after excitation and is virtually complete within 10 ps. Nonetheless, the fluorescence lifetime of the supercomplex was 49-55 (±1) ps, depending on excitation wavelength, compared to 22 ps in the core complex. This result suggests that energy transfer continues over tens of ps, long after thermal equilibration between high- and low-energy excited states. The fluorescence analysis suggests that two factors contribute to the increased excitation lifetime - a thermodynamic factor, directly stemming from the increased antenna size as well as a kinetic factor, i.e. a rate limitation of trapping imposed by the energy transfer from LHCI to PSI. The average time of excitation transfer from LHCI to the reaction center was estimated to be close to 30 ps. Therefore, energy transfer from the enlarged antenna does not impose a sizeable kinetic limitation to the photochemical quantum efficiency of the photosystem.

来自虹吸绿藻苔藓的光系统I (PSI)携带10个光收集复合物I (LHCI)亚基,这些亚基可以扩大其吸收截面,但仍然必须将激发快速传递到P700反应中心。本文研究了PSI-LHCI的光收集功能、超配合物内部的激发能转移及其对整体光化学捕获寿命的影响。我们对纯化的PSI-LHCI超配合物进行了室温皮秒时间分辨荧光光谱和77 K飞秒瞬态吸收光谱。超快光谱分析表明,天线中的光谱平衡主要发生在激发后的前1ps,几乎在10ps内完成。尽管如此,根据激发波长的不同,超配合物的荧光寿命为49-55(±1)ps,而核心配合物的荧光寿命为22 ps。这一结果表明,在高能量激发态和低能激发态之间的热平衡之后,能量转移仍持续超过数十ps。荧光分析表明,有两个因素导致了激发寿命的增加——一个是热力学因素,直接源于天线尺寸的增加;另一个是动力学因素,即从LHCI到PSI的能量转移所施加的捕获速率限制。从LHCI到反应中心的激发转移的平均时间估计接近30 ps。因此,放大天线的能量转移不会对光系统的光化学量子效率造成相当大的动力学限制。
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引用次数: 0
Changes in light-harvesting and energy-transfer processes of the chlorophyll d-dominated cyanobacterium Acaryochloris marina in response to different light qualities. 叶绿素d主导蓝藻Acaryochloris marina光捕获和能量传递过程对不同光质量的响应
IF 3.7 3区 生物学 Q2 PLANT SCIENCES Pub Date : 2025-11-17 DOI: 10.1007/s11120-025-01182-1
Zhe Wang, Yoshifumi Ueno, Reona Toyofuku, Tatsuya Tomo, Seiji Akimoto

Acaryochloris marina (A. marina) is a distinctive cyanobacterium that contains rod-shaped phycobiliproteins (PBPs) and uses chlorophyll (Chl) d as its principal photosynthetic pigment, enabling it to absorb far-red light for photosynthesis. Under varying environmental light conditions, several cyanobacteria have been reported to exhibit decreased PBP content under red light and increased levels under green light. For A. marina, a reduction in PBP has also been observed under red and far-red light. However, the changes in light-harvesting and energy-transfer processes of A. marina in response to different light qualities remain insufficiently characterized. In the present study, A. marina cells were cultured under white, blue, green, yellow, red, or far-red LEDs. Compared with cultures grown under white-LEDs, blue-, red-, and far-red-LED-grown cells showed a decrease in the PBP/Chl d ratio, whereas green- and yellow-LED-grown cells showed an increase. The energy-transfer process of green-LED-grown cells at 77 K exhibited pronounced alterations in photosystem II. Based on these findings, we discuss the variations in light-harvesting and energy-transfer processes of A. marina under different light conditions.

滨海Acaryochloris marina (a . marina)是一种独特的蓝藻,含有棒状藻胆蛋白(PBPs),并以叶绿素(Chl) d作为其主要光合色素,使其能够吸收远红光进行光合作用。据报道,在不同的环境光条件下,几种蓝藻在红光下表现出PBP含量下降,而在绿光下表现出PBP含量增加。在红光和远红光下,也观察到a . marina的PBP降低。然而,目前还没有充分的研究表明,马尾藻在不同光质量下的光收集和能量传递过程的变化。在本研究中,A. marina细胞在白色、蓝色、绿色、黄色、红色或远红色led下培养。与白光led下培养的细胞相比,蓝色、红色和远红色led下培养的细胞的PBP/Chl - d比率下降,而绿色和黄色led下培养的细胞的PBP/Chl - d比率上升。77 K下绿色led生长细胞的能量传递过程在光系统II中表现出明显的变化。在此基础上,我们讨论了不同光照条件下海苔的光收集和能量传递过程的变化。
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引用次数: 0
Energy transfers between the B850 antennas: hybrid hierarchical equation approach. B850天线之间的能量传输:混合层次方程方法。
IF 3.7 3区 生物学 Q2 PLANT SCIENCES Pub Date : 2025-11-17 DOI: 10.1007/s11120-025-01184-z
Vladimir I Novoderezhkin

We model the energy transfers between two B850 antenna units using the hybrid hierarchical equation (HEOM) method, where intra-B850 dynamics is evaluated nonperturbatively using HEOM, whereas inter-B850 transfers are treated by the generalized Förster theory. To account for a conformation-induced energetic disorder we use a realistic model emerging from a quantitative explanation of the single molecule spectral fluctuations in the B850 antenna. The disorder produces a variety of configurations including realizations where the exciton states are predominantly localized at the red-shifted sites. A slow detrapping of excitation from the red states can compete with the transfers to the adjacent B850 unit, thus slowing down the whole equilibration dynamics. In order to highlight the interplay between intra-B850 dynamics and migration to neighboring B850 complex we analyze the diversity of scenarios produced by specific disorder patterns within both donor and acceptor units.

我们使用混合层次方程(HEOM)方法对两个B850天线单元之间的能量传递进行建模,其中使用HEOM方法对B850内部动力学进行非扰动评估,而B850之间的传递则由广义Förster理论处理。为了解释构象引起的能量紊乱,我们使用了一个从B850天线单分子光谱波动的定量解释中出现的现实模型。这种无序产生了多种构型,包括激子态主要定位于红移位点的实现。从红态中缓慢去除激励会与向邻近的B850单元的转移相竞争,从而减慢整个平衡动力学。为了突出B850内部动态和向邻近B850复合体迁移之间的相互作用,我们分析了供体和受体单位内特定紊乱模式产生的情景多样性。
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引用次数: 0
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Photosynthesis Research
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