Revolutionizing Playing with Skeleton Atoms: Molecular Editing Surgery in Medicinal Chemistry

A. Rabie
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Abstract

Finding the most perfect drug candidates in the fields of drug discovery and medicinal chemistry will remain the main interest of drug designers. This concern necessitates organic and medicinal chemists, in most examples, to precisely design and search for drug candidates that are very analogous to the present effective drugs for solving, mainly, their proven critical pharmacological and clinical issues through slightly changing one or two atoms of the principal functional skeletons of the molecules of present therapeutics by atom swapping, removal, and/or addition procedures in organic chemical synthesis. This accurate modern chemicosimilarity tactic in drug discovery surely saves time while keeping us very close, or sometimes highly superior, to the parent pharmacophoric bioactivity (i.e., keeping considerable analogy to the parent therapeutic molecule). From this perspective and logic, the science of skeletal editing of molecules (i.e., skeletal molecular editing) arose in the era of artificial intelligence (AI) and its dramatic predictions. As a pioneer in this modern branch in pharmaceutical and therapeutic organic chemistry, in this up-to-date minireview and perspective article, an attempt was made to introduce skeletal editing and its synthetic surgeries (over molecules) to the audience (including irrelevant readers) in a simpler and more attractive way as a novel chemical technology, highlighting the previous synthetic trials (in general), demonstrating the three main techniques, and, finally, discussing the future therapeutic needs and scenarios from a medicinal chemist's viewpoint.
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用骨架原子玩转革命:药物化学中的分子编辑手术
在药物发现和药物化学领域寻找最完美的候选药物仍然是药物设计人员的主要兴趣所在。这就要求有机化学家和药物化学家在大多数情况下精确地设计和寻找与现有有效药物非常相似的候选药物,主要是通过有机化学合成中的原子交换、移除和/或添加过程,稍微改变现有治疗药物分子主要功能骨架中的一两个原子,以解决其已被证实的关键药理和临床问题。这种精确的现代药物化学相似性发现方法确实节省了时间,同时使我们与母体的药效生物活性非常接近,有时甚至非常优越(即与母体治疗分子保持相当大的相似性)。从这个角度和逻辑来看,分子骨架编辑(即骨架分子编辑)科学产生于人工智能(AI)时代及其戏剧性的预测。作为制药和治疗有机化学这一现代分支的先驱,在这篇最新的小视角文章中,我们试图以一种更简单、更有吸引力的方式,向读者(包括无关读者)介绍骨架编辑及其合成手术(在分子上)这一新型化学技术,重点介绍以往的合成试验(总体上),演示三种主要技术,最后从药物化学家的角度讨论未来的治疗需求和方案。
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