Modeling reveals synergies among root traits for phosphorus acquisition in pearl millet

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Abstract

Pearl millet is a key food security grain crop in the world's drylands due to its tolerance to abiotic stresses. However, its yield remains low and is negatively impacted by climate change. Root phenes are potential targets to improve crop productivity and resilience to environmental stress. However, the sheer number of combinations resulting from interactions of multiple phenes is a challenge for empirical research. In silico approaches are a plausible alternative to assess the utility of different phene combinations in varying states over diverse environmental contexts. Here, we developed an implementation of the functional-structural plant/soil model – OpenSimRoot, for pearl millet in typical sub-Sahelian soil and environmental conditions. Root architectural, anatomical, and physiological parameters were measured using a popular pearl millet variety (Souna 3) and implemented in the model. The above-ground biomass and root length density predicted by the model were similar to data from field trials. The utility of different root phenes was then evaluated for improved phosphorus uptake and plant growth in P deficient soils. Doubled root hair length and density, shallower root angle (−15°) and doubled long lateral root density were found to improve plant growth by 76 ​%, 33 ​% and 33 ​% respectively under low P conditions. Moreover, these phenes showed synergism when combined in silico and led to optimal biomass production in low P supply conditions that resulted in a 75 ​% loss of biomass in the reference variety. Our study suggests that these phenotypes could be targeted to improve biomass production in pearl millet and consequently its yield in low-P availability conditions.

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建模揭示珍珠粟根性状对磷获取的协同作用
由于对非生物胁迫的耐受性,珍珠粟是世界干旱地区重要的粮食安全粮食作物。然而,它的产量仍然很低,并受到气候变化的负面影响。根表皮是提高作物产量和抗环境胁迫能力的潜在目标。然而,多种表型相互作用产生的组合数量庞大,这对实证研究是一个挑战。硅学方法是一种可行的替代方法,可用于评估不同表型组合在不同环境背景下的不同状态下的效用。在此,我们开发了一个功能结构植物/土壤模型--OpenSimRoot--的实施方案,该模型适用于典型的亚萨赫勒土壤和环境条件下的珍珠粟。我们使用一个常用的珍珠粟品种(Souna 3)测量了根的结构、解剖和生理参数,并将其应用到模型中。模型预测的地上生物量和根长密度与田间试验数据相似。然后评估了不同根系表型对改善缺磷土壤中磷吸收和植物生长的效用。结果发现,在低钾条件下,加倍的根毛长度和密度、较浅的根角(-15°)和加倍的长侧根密度可分别提高植物生长的 76%、33% 和 33%。此外,这些表型在硅学中结合在一起时显示出协同作用,在低磷供应条件下产生最佳生物量,而参照品种的生物量损失为 75%。我们的研究表明,可以利用这些表型来提高珍珠粟的生物量,从而提高其在低磷供应条件下的产量。
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