Huifeng Yuan , Lijing Cheng , Yuying Pan , Zhetao Tan , Qian Liu , Zhong Jin
{"title":"A multi-level parallel approach to increase the computation efficiency of a global ocean temperature dataset reconstruction","authors":"Huifeng Yuan , Lijing Cheng , Yuying Pan , Zhetao Tan , Qian Liu , Zhong Jin","doi":"10.1016/j.jpdc.2024.104938","DOIUrl":null,"url":null,"abstract":"<div><p>There is an increasing need to provide real-time datasets for climate monitoring and applications. However, the current data products from all international groups have at least a month delay for data release. One reason for this delay is the long computing time of the global reconstruction algorithm (so-called mapping approach). To tackle this issue, this paper proposes a multi-level parallel computing model to improve the efficiency of data construction by parallelization of computation, reducing code branch prediction, optimizing data spatial locality, cache utilization, and other measures. This model has been applied to a mapping approach proposed by the Institute of Atmospheric Physics (IAP), one of the world's most widely used data products in the ocean and climate field. Compared with the traditional serial construction of MATLAB-based scheme on a single node, the speed of the construction after parallel optimizations is speeded up by ∼4.7 times. A large-scale parallel experiment of a long-term (∼1000 months) gridded dataset utilizing over 16,000 processor cores proves the model's scalability, improving ∼1200 times. In summary, this new model represents another example of the application of high-performance computing in oceanography and climatology.</p></div>","PeriodicalId":54775,"journal":{"name":"Journal of Parallel and Distributed Computing","volume":"192 ","pages":"Article 104938"},"PeriodicalIF":3.4000,"publicationDate":"2024-06-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of Parallel and Distributed Computing","FirstCategoryId":"94","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S0743731524001023","RegionNum":3,"RegionCategory":"计算机科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"COMPUTER SCIENCE, THEORY & METHODS","Score":null,"Total":0}
引用次数: 0
Abstract
There is an increasing need to provide real-time datasets for climate monitoring and applications. However, the current data products from all international groups have at least a month delay for data release. One reason for this delay is the long computing time of the global reconstruction algorithm (so-called mapping approach). To tackle this issue, this paper proposes a multi-level parallel computing model to improve the efficiency of data construction by parallelization of computation, reducing code branch prediction, optimizing data spatial locality, cache utilization, and other measures. This model has been applied to a mapping approach proposed by the Institute of Atmospheric Physics (IAP), one of the world's most widely used data products in the ocean and climate field. Compared with the traditional serial construction of MATLAB-based scheme on a single node, the speed of the construction after parallel optimizations is speeded up by ∼4.7 times. A large-scale parallel experiment of a long-term (∼1000 months) gridded dataset utilizing over 16,000 processor cores proves the model's scalability, improving ∼1200 times. In summary, this new model represents another example of the application of high-performance computing in oceanography and climatology.
期刊介绍:
This international journal is directed to researchers, engineers, educators, managers, programmers, and users of computers who have particular interests in parallel processing and/or distributed computing.
The Journal of Parallel and Distributed Computing publishes original research papers and timely review articles on the theory, design, evaluation, and use of parallel and/or distributed computing systems. The journal also features special issues on these topics; again covering the full range from the design to the use of our targeted systems.