Machine learning constructs a diagnostic prediction model for calculous pyonephrosis.

IF 2 2区 医学 Q2 UROLOGY & NEPHROLOGY Urolithiasis Pub Date : 2024-06-19 DOI:10.1007/s00240-024-01587-y
Bin Yang, Jiao Zhong, Yalin Yang, Jin Xu, Hua Liu, Jianhe Liu
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Abstract

In order to provide decision-making support for the auxiliary diagnosis and individualized treatment of calculous pyonephrosis, the study aims to analyze the clinical features of the condition, investigate its risk factors, and develop a prediction model of the condition using machine learning techniques. A retrospective analysis was conducted on the clinical data of 268 patients with calculous renal pelvic effusion who underwent ultrasonography-guided percutaneous renal puncture and drainage in our hospital during January 2018 to December 2022. The patients were included into two groups, one for pyonephrosis and the other for hydronephrosis. At a random ratio of 7:3, the research cohort was split into training and testing data sets. Single factor analysis was utilized to examine the 43 characteristics of the hydronephrosis group and the pyonephrosis group using the T test, Spearman rank correlation test and chi-square test. Disparities in the characteristic distributions between the two groups in the training and test sets were noted. The features were filtered using the minimal absolute value shrinkage and selection operator on the training set of data. Auxiliary diagnostic prediction models were established using the following five machine learning (ML) algorithms: random forest (RF), xtreme gradient boosting (XGBoost), support vector machines (SVM), gradient boosting decision trees (GBDT) and logistic regression (LR). The area under the curve (AUC) was used to compare the performance, and the best model was chosen. The decision curve was used to evaluate the clinical practicability of the models. The models with the greatest AUC in the training dataset were RF (1.000), followed by XGBoost (0.999), GBDT (0.977), and SVM (0.971). The lowest AUC was obtained by LR (0.938). With the greatest AUC in the test dataset going to GBDT (0.967), followed by LR (0.957), XGBoost (0.950), SVM (0.939) and RF (0.924). LR, GBDT and RF models had the highest accuracy were 0.873, followed by SVM, and the lowest was XGBoost. Out of the five models, the LR model had the best sensitivity and specificity is 0.923 and 0.887. The GBDT model had the highest AUC among the five models of calculous pyonephrosis developed using the ML, followed by the LR model. The LR model was considered be the best prediction model when combined with clinical operability. As it comes to diagnosing pyonephrosis, the LR model was more credible and had better prediction accuracy than common analysis approaches. Its nomogram can be used as an additional non-invasive diagnostic technique.

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机器学习构建了结石性肾盂积水的诊断预测模型。
为了给结石性肾盂积水的辅助诊断和个体化治疗提供决策支持,本研究旨在分析该病的临床特征,探究其危险因素,并利用机器学习技术建立该病的预测模型。研究对2018年1月至2022年12月期间在我院接受超声引导下经皮肾穿刺引流术的268例结石性肾盂积水患者的临床资料进行了回顾性分析。将患者分为两组,一组为肾盂积水,另一组为肾积水。按照 7:3 的随机比例,研究队列被分成训练数据集和测试数据集。使用 T 检验、斯皮尔曼秩相关检验和卡方检验,对肾积水组和肾盂积水组的 43 个特征进行了单因素分析。我们注意到了训练集和测试集中两组特征分布的差异。使用最小绝对值收缩和选择算子对训练集数据进行特征筛选。使用以下五种机器学习(ML)算法建立了辅助诊断预测模型:随机森林(RF)、极端梯度提升(XGBoost)、支持向量机(SVM)、梯度提升决策树(GBDT)和逻辑回归(LR)。曲线下面积(AUC)用于比较性能,并选出最佳模型。决策曲线用于评估模型的临床实用性。在训练数据集中,AUC 最大的模型是 RF(1.000),其次是 XGBoost(0.999)、GBDT(0.977)和 SVM(0.971)。AUC 最低的是 LR(0.938)。在测试数据集中,GBDT 的 AUC 最大(0.967),其次是 LR(0.957)、XGBoost(0.950)、SVM(0.939)和 RF(0.924)。LR、GBDT 和 RF 模型的准确度最高,分别为 0.873,其次是 SVM,最低的是 XGBoost。在五个模型中,LR 模型的灵敏度和特异度最好,分别为 0.923 和 0.887。在使用 ML 建立的五个结石性肾盂积水模型中,GBDT 模型的 AUC 最高,其次是 LR 模型。LR 模型被认为是结合临床可操作性的最佳预测模型。在诊断肾盂积水方面,LR 模型比普通分析方法更可信,预测准确性更高。其提名图可作为一种额外的非侵入性诊断技术。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Urolithiasis
Urolithiasis UROLOGY & NEPHROLOGY-
CiteScore
4.50
自引率
6.50%
发文量
74
期刊介绍: Official Journal of the International Urolithiasis Society The journal aims to publish original articles in the fields of clinical and experimental investigation only within the sphere of urolithiasis and its related areas of research. The journal covers all aspects of urolithiasis research including the diagnosis, epidemiology, pathogenesis, genetics, clinical biochemistry, open and non-invasive surgical intervention, nephrological investigation, chemistry and prophylaxis of the disorder. The Editor welcomes contributions on topics of interest to urologists, nephrologists, radiologists, clinical biochemists, epidemiologists, nutritionists, basic scientists and nurses working in that field. Contributions may be submitted as full-length articles or as rapid communications in the form of Letters to the Editor. Articles should be original and should contain important new findings from carefully conducted studies designed to produce statistically significant data. Please note that we no longer publish articles classified as Case Reports. Editorials and review articles may be published by invitation from the Editorial Board. All submissions are peer-reviewed. Through an electronic system for the submission and review of manuscripts, the Editor and Associate Editors aim to make publication accessible as quickly as possible to a large number of readers throughout the world.
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