Iterative Regression of Corrective Baselines (IRCB): A New Model for Quantitative Spectroscopy

IF 5.6 2区 化学 Q1 CHEMISTRY, MEDICINAL Journal of Chemical Information and Modeling Pub Date : 2024-06-19 DOI:10.1021/acs.jcim.4c00359
Matthew Glace, Roudabeh S. Moazeni-Pourasil, Daniel W. Cook and Thomas D. Roper*, 
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Abstract

In this work, a new model with broad utility for quantitative spectroscopy development is reported. A primary objective of this work is to create a novel modeling procedure that may allow for higher automation of the model development process. The fundamental concept is simple yet powerful even for complex spectra and is employed with no additional preprocessing. This approach is applicable for several types of spectroscopic data to develop regression models that have similar or greater quality than the current methods. The key modeling steps are a matrix transformation and subsequent feature selection process that are collectively referred to as iterative regression of corrective baselines (IRCB). The transformed matrix (Xtransform) is a linearized form of the original X data set. Features from Xtransform that are predictive of Y can be ranked and selected by ordinary least-squares regression. The best features (rows of Xtransform) are linear depictions of Y that can be utilized to develop regression models with several machine learning models. The IRCB workflow is first detailed by using a case study of Fourier transform infrared (FTIR) spectroscopy for prepared solutions of a three-component mixture. Next, IRCB is applied and compared to benchmark results for the 2006 “Chimiométrie” near-infrared spectroscopy (NIR) soil composition challenge and Raman measurements of a simulated nuclear waste slurry.

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校正基线迭代回归(IRCB):光谱定量分析的新模式。
在这项工作中,报告了一个在定量光谱开发方面具有广泛用途的新模型。这项工作的主要目的是创建一个新颖的建模程序,从而提高模型开发过程的自动化程度。其基本概念简单而强大,即使对于复杂的光谱也是如此,而且无需额外的预处理。这种方法适用于多种类型的光谱数据,可开发出质量与现有方法相似或更高的回归模型。建模的关键步骤是矩阵变换和随后的特征选择过程,统称为修正基线迭代回归(IRCB)。转换后的矩阵(Xtransform)是原始 X 数据集的线性化形式。可以通过普通最小二乘回归对 Xtransform 中可预测 Y 的特征进行排序和选择。最佳特征(Xtransform 的行)是 Y 的线性描述,可用于使用多个机器学习模型开发回归模型。IRCB 工作流程首先通过对三组分混合物配制溶液的傅立叶变换红外光谱(FTIR)案例研究进行详细说明。接下来,应用 IRCB 并与 2006 年 "Chimiométrie "近红外光谱(NIR)土壤成分挑战赛的基准结果和模拟核废料浆液的拉曼测量结果进行比较。
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来源期刊
CiteScore
9.80
自引率
10.70%
发文量
529
审稿时长
1.4 months
期刊介绍: The Journal of Chemical Information and Modeling publishes papers reporting new methodology and/or important applications in the fields of chemical informatics and molecular modeling. Specific topics include the representation and computer-based searching of chemical databases, molecular modeling, computer-aided molecular design of new materials, catalysts, or ligands, development of new computational methods or efficient algorithms for chemical software, and biopharmaceutical chemistry including analyses of biological activity and other issues related to drug discovery. Astute chemists, computer scientists, and information specialists look to this monthly’s insightful research studies, programming innovations, and software reviews to keep current with advances in this integral, multidisciplinary field. As a subscriber you’ll stay abreast of database search systems, use of graph theory in chemical problems, substructure search systems, pattern recognition and clustering, analysis of chemical and physical data, molecular modeling, graphics and natural language interfaces, bibliometric and citation analysis, and synthesis design and reactions databases.
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