Integration of pH Control into Chi.Bio Reactors and Demonstration with Small-Scale Enzymatic Poly(ethylene terephthalate) Hydrolysis

IF 2.9 3区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Biochemistry Biochemistry Pub Date : 2024-06-22 DOI:10.1021/acs.biochem.4c00149
Mackenzie C. R. Denton, Natasha P. Murphy, Brenna Norton-Baker, Mauro Lua, Harrison Steel and Gregg T. Beckham*, 
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Abstract

Small-scale bioreactors that are affordable and accessible would be of major benefit to the research community. In previous work, an open-source, automated bioreactor system was designed to operate up to the 30 mL scale with online optical monitoring, stirring, and temperature control, and this system, dubbed Chi.Bio, is now commercially available at a cost that is typically 1–2 orders of magnitude less than commercial bioreactors. In this work, we further expand the capabilities of the Chi.Bio system by enabling continuous pH monitoring and control through hardware and software modifications. For hardware modifications, we sourced low-cost, commercial pH circuits and made straightforward modifications to the Chi.Bio head plate to enable continuous pH monitoring. For software integration, we introduced closed-loop feedback control of the pH measured inside the Chi.Bio reactors and integrated a pH-control module into the existing Chi.Bio user interface. We demonstrated the utility of pH control through the small-scale depolymerization of the synthetic polyester, poly(ethylene terephthalate) (PET), using a benchmark cutinase enzyme, and compared this to 250 mL bioreactor hydrolysis reactions. The results in terms of PET conversion and rate, measured both by base addition and product release profiles, are statistically equivalent, with the Chi.Bio system allowing for a 20-fold reduction of purified enzyme required relative to the 250 mL bioreactor setup. Through inexpensive modifications, the ability to conduct pH control in Chi.Bio reactors widens the potential slate of biochemical reactions and biological cultivations for study in this system, and may also be adapted for use in other bioreactor platforms.

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将 pH 值控制纳入 Chi.Bio 反应器并通过小规模酶促聚对苯二甲酸乙二醇酯水解进行示范。
经济实惠、易于使用的小规模生物反应器对研究界大有裨益。在之前的工作中,我们设计了一个开源的自动化生物反应器系统,可运行到 30 毫升的规模,并具有在线光学监测、搅拌和温度控制功能。该系统被称为 Chi.Bio,现已投入商用,其成本通常比商用生物反应器低 1-2 个数量级。在这项工作中,我们通过硬件和软件改造,实现了连续 pH 值监测和控制,从而进一步扩展了 Chi.Bio 系统的功能。在硬件改造方面,我们采购了低成本的商用 pH 电路,并对 Chi.Bio 头板进行了直接改造,以实现连续 pH 监测。在软件集成方面,我们引入了对Chi.Bio反应器内部pH值测量的闭环反馈控制,并将pH值控制模块集成到现有的Chi.Bio用户界面中。我们通过使用基准 cutinase 酶对合成聚酯聚对苯二甲酸乙二酯(PET)进行小规模解聚,展示了 pH 控制的实用性,并将其与 250 mL 生物反应器水解反应进行了比较。通过碱添加和产品释放曲线测量 PET 的转化率和速率,结果在统计学上是相同的,与 250 mL 生物反应器装置相比,Chi.Bio 系统可将所需的纯化酶减少 20 倍。通过廉价的改装,在 Chi.Bio 反应器中进行 pH 控制的能力拓宽了在该系统中研究生化反应和生物培养的潜在范围,也可用于其他生物反应器平台。
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来源期刊
Biochemistry Biochemistry
Biochemistry Biochemistry 生物-生化与分子生物学
CiteScore
5.50
自引率
3.40%
发文量
336
审稿时长
1-2 weeks
期刊介绍: Biochemistry provides an international forum for publishing exceptional, rigorous, high-impact research across all of biological chemistry. This broad scope includes studies on the chemical, physical, mechanistic, and/or structural basis of biological or cell function, and encompasses the fields of chemical biology, synthetic biology, disease biology, cell biology, nucleic acid biology, neuroscience, structural biology, and biophysics. In addition to traditional Research Articles, Biochemistry also publishes Communications, Viewpoints, and Perspectives, as well as From the Bench articles that report new methods of particular interest to the biological chemistry community.
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