NRC Immune receptor networks show diversified hierarchical genetic architecture across plant lineages.

IF 10 1区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Plant Cell Pub Date : 2024-09-03 DOI:10.1093/plcell/koae179
Foong-Jing Goh, Ching-Yi Huang, Lida Derevnina, Chih-Hang Wu
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Abstract

Plants' complex immune systems include nucleotide-binding domain and leucine-rich repeat-containing (NLR) proteins, which help recognize invading pathogens. In solanaceous plants, the NRC (NLR required for cell death) family includes helper NLRs that form a complex genetic network with multiple sensor NLRs to provide resistance against pathogens. However, the evolution and function of NRC networks outside solanaceous plants are currently unclear. Here, we conducted phylogenomic and macroevolutionary analyses comparing NLRs identified from different asterid lineages and found that NRC networks expanded significantly in most lamiids but not in Ericales and campanulids. Using transient expression assays in Nicotiana benthamiana, we showed that NRC networks are simple in Ericales and campanulids, but have high complexity in lamiids. Phylogenetic analyses grouped the NRC helper NLRs into three NRC0 subclades that are conserved, and several family-specific NRC subclades of lamiids that show signatures of diversifying selection. Functional analyses revealed that members of the NRC0 subclades are partially interchangeable, whereas family-specific NRC members in lamiids lack interchangeability. Our findings highlight the distinctive evolutionary patterns of the NRC networks in asterids and provide potential insights into transferring disease resistance across plant lineages.

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NRC 免疫受体网络在不同植物品系中显示出多样化的分层遗传结构。
植物的复杂免疫系统包括核苷酸结合域和富含亮氨酸重复(NLR)蛋白,它们有助于识别入侵的病原体。在茄科植物中,NRC(细胞死亡所需的 NLR)家族包括辅助 NLR,这些 NLR 与多个传感器 NLR 形成复杂的遗传网络,从而提供抵抗病原体的能力。然而,目前还不清楚茄科植物以外的 NRC 网络的进化和功能。在这里,我们进行了系统发生组学和宏观进化分析,比较了从不同菊科植物中鉴定出的 NLRs,发现 NRC 网络在大多数菊科植物中显著扩展,但在酢浆草科和钟乳科植物中却没有。通过在烟草本根中进行瞬时表达试验,我们发现,NRC网络在Ericales和campanulids中很简单,但在lamiids中却很复杂。系统发生学分析将 NRC 辅助 NLR 分成三个 NRC0 亚支系,它们是保守的,而拉米亚科的几个科特异性 NRC 亚支系则显示出多样化选择的特征。功能分析显示,NRC0 亚支系的成员具有部分互换性,而拉米目动物家族特有的 NRC 成员则缺乏互换性。我们的发现突显了小行星类 NRC 网络独特的进化模式,并为植物抗病性的跨系转移提供了潜在的启示。
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来源期刊
Plant Cell
Plant Cell 生物-生化与分子生物学
CiteScore
16.90
自引率
5.20%
发文量
337
审稿时长
2.4 months
期刊介绍: Title: Plant Cell Publisher: Published monthly by the American Society of Plant Biologists (ASPB) Produced by Sheridan Journal Services, Waterbury, VT History and Impact: Established in 1989 Within three years of publication, ranked first in impact among journals in plant sciences Maintains high standard of excellence Scope: Publishes novel research of special significance in plant biology Focus areas include cellular biology, molecular biology, biochemistry, genetics, development, and evolution Primary criteria: articles provide new insight of broad interest to plant biologists and are suitable for a wide audience Tenets: Publish the most exciting, cutting-edge research in plant cellular and molecular biology Provide rapid turnaround time for reviewing and publishing research papers Ensure highest quality reproduction of data Feature interactive format for commentaries, opinion pieces, and exchange of information in review articles, meeting reports, and insightful overviews.
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