Combining Morphological Characteristics and DNA Barcoding Techniques Confirm Sea Urchins of the Genus Echinometra (Echinodermata: Echinoidea) in Marine Habitat Located at Extreme Regions of the Caribbean Sea.
{"title":"Combining Morphological Characteristics and DNA Barcoding Techniques Confirm Sea Urchins of the Genus Echinometra (Echinodermata: Echinoidea) in Marine Habitat Located at Extreme Regions of the Caribbean Sea.","authors":"Stanton G Belford","doi":"10.1093/icb/icae083","DOIUrl":null,"url":null,"abstract":"<p><p>Echinometra spp. are pantropical echinoids found in benthic marine habitat throughout the Caribbean, Atlantic, and Indo-West Pacific oceanic regions. Currently, morphology and molecular data are sparse for echinoids observed along the northeastern coast of Toco, Trinidad, where they are relatively common. Additionally, accurate species identity for Echinometra spp. remains dynamic at both northernmost and southernmost parts of the Caribbean Sea. Although distribution of sea urchins in the genus Echinometra have extensively been studied throughout the Atlantic and Indo-West Pacific, information on its range of distribution at the edge of the Caribbean Sea is lacking. In this study, the mitochondrial Cytochrome c Oxidase subunit I (mt COI) gene was amplified using polymerase chain reaction, then sequenced. Based on successfully obtained gene sequences for 581 base pairs, the echinoid species Echinometra lucunter and Echinometra viridis were identified for black and red color morphotypes from Trinidad (n = 23) and Key Largo, Florida (n = 6), respectively. Furthermore, these specimens were genetically identical to species identified in other studies for Puerto Rico, Panamá, Honduras, and Belize. Although morphological variations, such as spine and test color occur throughout Echinometra spp., molecular identification using the barcoding technique confirmed E. lucunter color morphs for the first time in Trinidad. Since the status of E. lucunter populations, specifically at the most northern and southern regions of the Caribbean Sea is dynamic, further studies using gene markers are essential in determining species distribution, in light of current trends in climate change.</p>","PeriodicalId":54971,"journal":{"name":"Integrative and Comparative Biology","volume":null,"pages":null},"PeriodicalIF":2.2000,"publicationDate":"2024-10-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Integrative and Comparative Biology","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1093/icb/icae083","RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"ZOOLOGY","Score":null,"Total":0}
引用次数: 0
Abstract
Echinometra spp. are pantropical echinoids found in benthic marine habitat throughout the Caribbean, Atlantic, and Indo-West Pacific oceanic regions. Currently, morphology and molecular data are sparse for echinoids observed along the northeastern coast of Toco, Trinidad, where they are relatively common. Additionally, accurate species identity for Echinometra spp. remains dynamic at both northernmost and southernmost parts of the Caribbean Sea. Although distribution of sea urchins in the genus Echinometra have extensively been studied throughout the Atlantic and Indo-West Pacific, information on its range of distribution at the edge of the Caribbean Sea is lacking. In this study, the mitochondrial Cytochrome c Oxidase subunit I (mt COI) gene was amplified using polymerase chain reaction, then sequenced. Based on successfully obtained gene sequences for 581 base pairs, the echinoid species Echinometra lucunter and Echinometra viridis were identified for black and red color morphotypes from Trinidad (n = 23) and Key Largo, Florida (n = 6), respectively. Furthermore, these specimens were genetically identical to species identified in other studies for Puerto Rico, Panamá, Honduras, and Belize. Although morphological variations, such as spine and test color occur throughout Echinometra spp., molecular identification using the barcoding technique confirmed E. lucunter color morphs for the first time in Trinidad. Since the status of E. lucunter populations, specifically at the most northern and southern regions of the Caribbean Sea is dynamic, further studies using gene markers are essential in determining species distribution, in light of current trends in climate change.
结合形态特征和 DNA 条形码技术,确认了加勒比海极端地区海洋栖息地的棘海胆属(棘皮动物门:Echinoidea)。
棘尾虫属(Echinometra spp.)是泛热带回声类动物,分布于加勒比海、大西洋和印度-西太平洋海洋区域的海底海洋栖息地。目前,在特立尼达 Toco 东北海岸观察到的棘尾鱼的形态学和分子数据还很稀少,而棘尾鱼在该地区比较常见。此外,在加勒比海的最北端和最南端,棘尾海胆属的准确物种识别仍处于动态变化之中。尽管棘海胆属海胆在整个大西洋和印度-西太平洋的分布情况已得到广泛研究,但有关其在加勒比海边缘分布范围的信息仍很缺乏。本研究利用聚合酶链式反应扩增了线粒体细胞色素 c 氧化酶亚单位 I(mt COI)基因,并对其进行了测序。根据成功获得的 581 个碱基对的基因序列,分别从特立尼达岛(n = 23)和佛罗里达州基拉戈(n = 6)的黑色和红色形态中鉴定出回纹目物种 E. lucunter 和 E. viridis。此外,这些标本在遗传学上与其他研究中确定的波多黎各、巴拿马、洪都拉斯和伯利兹的物种相同。虽然棘尾蜥属动物都会出现脊柱和睾丸颜色等形态变化,但利用条形码技术进行的分子鉴定首次在特立尼达岛证实了 E. lucunter 的颜色形态。由于 E. lucunter 种群,特别是加勒比海最北部和南部地区的 E. lucunter 种群的状况是动态的,根据目前的气候变化趋势,利用基因标记进行进一步研究对于确定物种分布至关重要。
期刊介绍:
Integrative and Comparative Biology ( ICB ), formerly American Zoologist , is one of the most highly respected and cited journals in the field of biology. The journal''s primary focus is to integrate the varying disciplines in this broad field, while maintaining the highest scientific quality. ICB''s peer-reviewed symposia provide first class syntheses of the top research in a field. ICB also publishes book reviews, reports, and special bulletins.