Computer Modeling of the Mechanisms of Enzymatic Reactions: Lessons from 20 Years of Practice

IF 0.7 Q4 CHEMISTRY, MULTIDISCIPLINARY Moscow University Chemistry Bulletin Pub Date : 2024-06-04 DOI:10.3103/s0027131424700093
M. G. Khrenova, T. I. Mulashkina, A. M. Kulakova, I. V. Polyakov, A. V. Nemukhin
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Abstract

The combined quantum mechanics/molecular mechanics method is most often used to describe the molecular mechanisms of enzymatic reactions. The review discusses the main methodological issues, gives practical recommendations, and also illustrates the progress of the method over the past 20 years using an important example of the reaction of guanosine triphosphate hydrolysis by a protein complex.

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酶促反应机理的计算机建模:20 年实践的经验教训
摘要量子力学/分子力学相结合的方法最常用于描述酶促反应的分子机理。这篇综述讨论了主要的方法学问题,给出了实用建议,并以蛋白质复合物水解三磷酸鸟苷反应这一重要实例说明了该方法在过去 20 年中取得的进展。
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来源期刊
Moscow University Chemistry Bulletin
Moscow University Chemistry Bulletin CHEMISTRY, MULTIDISCIPLINARY-
CiteScore
1.30
自引率
14.30%
发文量
38
期刊介绍: Moscow University Chemistry Bulletin is a journal that publishes review articles, original research articles, and short communications on various areas of basic and applied research in chemistry, including medical chemistry and pharmacology.
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