Draft genome sequence of Agrobacterium pusense strain CMT1: A promising growth-promoting bacterium isolated from nodules of soybean (Glycine max L. Merrill) crops for the One Health approach in Paraguay

IF 4.8 Q1 MICROBIOLOGY Current Research in Microbial Sciences Pub Date : 2024-01-01 DOI:10.1016/j.crmicr.2024.100259

Antonio Samudio Oggero , Magalí Valdez Borda , Carmen María Félix Pablos , Gladis Leguizamón , Fernando Mathías Morínigo , Víctor González Caballero , Ariel Farías , Héctor Nakayama , Sergio de los Santos Villalobos

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Abstract

Strain CMT1 was isolated from nodules of non-inoculated Roundup Ready (RR) soybean plants (Glycine max L. Merrill), which were collected in fields in Itauguá, Paraguay. The genome of this strain had 338,984,909 bp; 59.2 % G + C content; 377648 bp N50; 5 L50; 55 contigs; 51 RNAs and 5,272 predicted coding DNA sequences (CDS) distributed in 327 subsystems. Based on overall genome-relatedness indices (OGRIs), this strain was taxonomically affiliated with Agrobacterium pusense. Based on genome mining, strain CMT1 is a promising plant growth-promoting bacterium that could be validated in agricultural fields for increasing soybean yield and quality, diminishing the economic, environmental, and health costs of non-sustainable food production.

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Pusense 农杆菌菌株 CMT1 的基因组序列草案：从巴拉圭大豆（Glycine max L. Merrill）作物的结核中分离出的有望促进生长的细菌，用于 "同一健康 "方法

CMT1 菌株是从巴拉圭伊陶瓜田间采集的未接种Roundup Ready (RR) 大豆植株（Glycine max L. Merrill）的结核中分离出来的。该菌株的基因组有 338,984,909 bp; 59.2 % G + C 含量; 377648 bp N50; 5 L50; 55 contigs; 51 RNAs 和 5,272 个预测编码 DNA 序列 (CDS) 分布在 327 个子系统中。根据总体基因组相关性指数（OGRIs），该菌株在分类学上隶属于普森氏农杆菌（Agrobacterium pusense）。根据基因组挖掘结果，菌株 CMT1 是一种很有前途的植物生长促进细菌，可在农田中验证，以提高大豆的产量和质量，降低不可持续的粮食生产所带来的经济、环境和健康成本。

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