Gene-vegetarianism interactions in calcium, estimated glomerular filtration rate, and testosterone identified in genome-wide analysis across 30 biomarkers.

IF 4 2区 生物学 Q1 GENETICS & HEREDITY PLoS Genetics Pub Date : 2024-07-11 eCollection Date: 2024-07-01 DOI:10.1371/journal.pgen.1011288
Michael Francis, Kenneth E Westerman, Alisa K Manning, Kaixiong Ye
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Abstract

We examined the associations of vegetarianism with metabolic biomarkers using traditional and genetic epidemiology. First, we addressed inconsistencies in self-reported vegetarianism among UK Biobank participants by utilizing data from two dietary surveys to find a cohort of strict European vegetarians (N = 2,312). Vegetarians were matched 1:4 with nonvegetarians for non-genetic association analyses, revealing significant effects of vegetarianism in 15 of 30 biomarkers. Cholesterol measures plus vitamin D were significantly lower in vegetarians, while triglycerides were higher. A genome-wide association study revealed no genome-wide significant (GWS; 5×10-8) associations with vegetarian behavior. We performed genome-wide gene-vegetarianism interaction analyses for the biomarkers, and detected a GWS interaction impacting calcium at rs72952628 (P = 4.47×10-8). rs72952628 is in MMAA, a B12 metabolic pathway gene; B12 has major deficiency potential in vegetarians. Gene-based interaction tests revealed two significant genes, RNF168 in testosterone (P = 1.45×10-6) and DOCK4 in estimated glomerular filtration rate (eGFR) (P = 6.76×10-7), which have previously been associated with testicular and renal traits, respectively. These nutrigenetic findings indicate genotype can modify the associations between vegetarianism and health outcomes.

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通过对 30 个生物标志物进行全基因组分析,确定了钙质、估计肾小球滤过率和睾酮的基因-素食相互作用。
我们利用传统流行病学和遗传流行病学研究了素食与代谢生物标志物之间的关系。首先,我们利用两次膳食调查的数据,找到了一批严格的欧洲素食主义者(N = 2,312),从而解决了英国生物库参与者自我报告的素食情况不一致的问题。素食者与非素食者1:4配对,进行非遗传关联分析,结果显示素食对30个生物标志物中的15个有显著影响。素食者的胆固醇和维生素 D 含量明显较低,而甘油三酯则较高。一项全基因组关联研究显示,素食行为与全基因组无明显(GWS;5×10-8)关联。我们对生物标志物进行了全基因组基因-素食交互分析,并在 rs72952628(P = 4.47×10-8)处发现了影响钙的 GWS 交互作用。基于基因的交互检验发现了两个重要的基因,即睾酮中的 RNF168(P = 1.45×10-6)和估计肾小球滤过率(eGFR)中的 DOCK4(P = 6.76×10-7),这两个基因以前分别与睾丸和肾脏特征有关。这些营养遗传学研究结果表明,基因型可改变素食与健康结果之间的关联。
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来源期刊
PLoS Genetics
PLoS Genetics GENETICS & HEREDITY-
自引率
2.20%
发文量
438
期刊介绍: PLOS Genetics is run by an international Editorial Board, headed by the Editors-in-Chief, Greg Barsh (HudsonAlpha Institute of Biotechnology, and Stanford University School of Medicine) and Greg Copenhaver (The University of North Carolina at Chapel Hill). Articles published in PLOS Genetics are archived in PubMed Central and cited in PubMed.
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