Exploring the mitogenomes of Batracomorphus (Hemiptera: Cicadellidae: Iassinae): new insights from structural diversity and phylogenomic analyses

IF 3.2 1区 农林科学 Q1 ENTOMOLOGY Insect Systematics and Diversity Pub Date : 2024-07-01 DOI:10.1093/isd/ixae013
Yulin Hu, Christopher H. Dietrich, Wu Dai
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Abstract

Comparisons of mitogenomes are widely used for species identification and to explore the phylogenetic relationship among insect taxa. Batracomorphus is the third most diverse and widely distributed genus in the Cicadellidae (Hemiptera). However, there have been no analyses of genome structure and phylogenetic relationships within the genus. To compensate for the paucity of genomic information in this genus, we sequenced novel complete mitochondrial genomes of 11 Batracomorphus species and combined these with 23 previously sequenced mitochondrial genomes to perform structural comparisons and phylogenomic studies. Our results reveal generally conserved mitogenome organization, with one case of tRNA gene rearrangement, with trnI-trnQ reversed to trnQ-trnI when compared with the ancestral arrangement. Analysis of the ratio of nonsynonymous (Ka) to synonymous substitutions (Ks) showed ATP8 is the fastest and COI is the slowest evolving gene. ND2 and ND6 have highly variable nucleotide diversity, whereas COI and ND1 exhibit the lowest diversity. Phylogenetic analysis of nucleotide sequences grouped Batracomorphus species into a clade within the subfamily Iassinae. Within Batracomorphus, 3 clades were reconstructed consistent with the observed gene rearrangement, indicating that such rearrangements can serve as reliable molecular markers supporting phylogenetic hypotheses. These clades also correspond to clusters of species recovered by morphometric analysis of aedeagal shape, suggesting that characters of the male genitalia traditionally used for species delimitation are phylogenetically informative. Molecular divergence time estimates indicate that most speciation events within Batracomorphus occurred between the Paleogene and Neogene. This study provides insight into the population genetics, molecular biology, phylogeny, and morphological evolution of the leafhopper subfamily Iassinae and its largest genus, Batracomorphus.
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探索蝙蝠蛾(半翅目:蝉科:Iassinae)的有丝分裂基因组:结构多样性和系统发生组分析的新发现
有丝分裂基因组的比较被广泛用于物种鉴定和探索昆虫类群之间的系统发育关系。蝙蝠蛾(Batracomorphus)是蝉科(半翅目)中种类最多、分布最广的第三大属。然而,目前还没有对该属的基因组结构和系统发育关系进行分析。为了弥补该属基因组信息的不足,我们对 11 个蝙蝠科物种的线粒体基因组进行了测序,并将其与之前测序的 23 个线粒体基因组结合起来,进行了结构比较和系统发生组研究。我们的研究结果表明,线粒体基因组的组织结构基本保持不变,但有一例 tRNA 基因重新排列,与祖先的排列相比,trnI-trnQ 被逆转为 trnQ-trnI。非同义替换(Ka)与同义替换(Ks)的比率分析表明,ATP8 是进化最快的基因,而 COI 是进化最慢的基因。ND2 和 ND6 的核苷酸多样性变化很大,而 COI 和 ND1 的多样性最低。核苷酸序列的系统进化分析将蝙蝠科物种归入鞘亚科的一个支系。在 Batracomorphus 中,重建的 3 个支系与观察到的基因重排一致,表明这种重排可作为支持系统发育假说的可靠分子标记。这些支系也与通过对雄性生殖器形状的形态计量分析所发现的物种群相对应,表明传统上用于物种划分的雄性生殖器特征具有系统发育信息。分子分化时间估计表明,蝙蝠蛾的大多数物种分化事件发生在古近纪和新近纪之间。本研究为叶蝉亚科 Iassinae 及其最大属 Batracomorphus 的种群遗传学、分子生物学、系统发育和形态演化提供了深入的见解。
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来源期刊
CiteScore
5.30
自引率
8.80%
发文量
34
期刊最新文献
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