CADS: A Self-supervised Learner via Cross-modal Alignment and Deep Self-distillation for CT Volume Segmentation.

Yiwen Ye, Jianpeng Zhang, Ziyang Chen, Yong Xia
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Abstract

Self-supervised learning (SSL) has long had great success in advancing the field of annotation-efficient learning. However, when applied to CT volume segmentation, most SSL methods suffer from two limitations, including rarely using the information acquired by different imaging modalities and providing supervision only to the bottleneck encoder layer. To address both limitations, we design a pretext task to align the information in each 3D CT volume and the corresponding 2D generated X-ray image and extend self-distillation to deep self-distillation. Thus, we propose a self-supervised learner based on Cross-modal Alignment and Deep Self-distillation (CADS) to improve the encoder's ability to characterize CT volumes. The cross-modal alignment is a more challenging pretext task that forces the encoder to learn better image representation ability. Deep self-distillation provides supervision to not only the bottleneck layer but also shallow layers, thus boosting the abilities of both. Comparative experiments show that, during pre-training, our CADS has lower computational complexity and GPU memory cost than competing SSL methods. Based on the pre-trained encoder, we construct PVT-UNet for 3D CT volume segmentation. Our results on seven downstream tasks indicate that PVT-UNet outperforms state-of-the-art SSL methods like MOCOv3 and DiRA, as well as prevalent medical image segmentation methods like nnUNet and CoTr. Code and pre-trained weight will be available at https://github.com/yeerwen/CADS.

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CADS:通过跨模态对齐和深度自分馏实现 CT 容积分割的自监督学习器。
长期以来,自我监督学习(SSL)在推动注释高效学习领域取得了巨大成功。然而,当应用于 CT 体块分割时,大多数 SSL 方法都存在两个局限性,包括很少使用不同成像模式获取的信息,以及只对瓶颈编码器层提供监督。为了解决这两个局限性,我们设计了一个借口任务来对齐每个三维 CT 体和相应的二维生成的 X 光图像中的信息,并将自抖动扩展到深度自抖动。因此,我们提出了一种基于跨模态配准和深度自馏(CADS)的自监督学习器,以提高编码器表征 CT 体的能力。跨模态对齐是一项更具挑战性的前置任务,它迫使编码器学习更好的图像表征能力。深度自发散不仅能对瓶颈层进行监督,还能对浅层进行监督,从而提高两者的能力。对比实验表明,在预训练过程中,我们的 CADS 的计算复杂度和 GPU 内存成本均低于同类 SSL 方法。在预训练编码器的基础上,我们构建了用于三维 CT 体块分割的 PVT-UNet。我们在七项下游任务上的结果表明,PVT-UNet 的性能优于 MOCOv3 和 DiRA 等最先进的 SSL 方法,以及 nnUNet 和 CoTr 等流行的医学图像分割方法。代码和预训练权重将在 https://github.com/yeerwen/CADS 网站上提供。
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