Machine learning to promote translational research: predicting patent and clinical trial inclusion in dementia research.

IF 4.1 Q1 CLINICAL NEUROLOGY Brain communications Pub Date : 2024-07-25 eCollection Date: 2024-01-01 DOI:10.1093/braincomms/fcae230
Matilda Beinat, Julian Beinat, Mohammed Shoaib, Jorge Gomez Magenti
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Abstract

Projected to impact 1.6 million people in the UK by 2040 and costing £25 billion annually, dementia presents a growing challenge to society. This study, a pioneering effort to predict the translational potential of dementia research using machine learning, hopes to address the slow translation of fundamental discoveries into practical applications despite dementia's significant societal and economic impact. We used the Dimensions database to extract data from 43 091 UK dementia research publications between the years 1990 and 2023, specifically metadata (authors, publication year, etc.), concepts mentioned in the paper and the paper abstract. To prepare the data for machine learning, we applied methods such as one-hot encoding and word embeddings. We trained a CatBoost Classifier to predict whether a publication will be cited in a future patent or clinical trial. We trained several model variations. The model combining metadata, concept and abstract embeddings yielded the highest performance: for patent predictions, an area under the receiver operating characteristic curve of 0.84 and 77.17% accuracy; for clinical trial predictions, an area under the receiver operating characteristic curve of 0.81 and 75.11% accuracy. The results demonstrate that integrating machine learning within current research methodologies can uncover overlooked publications, expediting the identification of promising research and potentially transforming dementia research by predicting real-world impact and guiding translational strategies.

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机器学习促进转化研究:预测痴呆症研究中的专利和临床试验纳入情况。
预计到2040年,英国将有160万人受到痴呆症的影响,每年的花费将达到250亿英镑,痴呆症给社会带来了越来越大的挑战。本研究是利用机器学习预测痴呆症研究转化潜力的一项开创性工作,希望能解决痴呆症对社会和经济产生重大影响的同时,基础发现转化为实际应用却进展缓慢的问题。我们使用 Dimensions 数据库从 1990 年至 2023 年间 43 091 篇英国痴呆症研究论文中提取数据,特别是元数据(作者、发表年份等)、论文中提到的概念和论文摘要。为准备机器学习数据,我们采用了单次编码和词嵌入等方法。我们训练了 CatBoost 分类器来预测一篇论文是否会在未来的专利或临床试验中被引用。我们训练了几种不同的模型。结合元数据、概念和摘要嵌入的模型性能最高:专利预测的接收者操作特征曲线下面积为 0.84,准确率为 77.17%;临床试验预测的接收者操作特征曲线下面积为 0.81,准确率为 75.11%。研究结果表明,将机器学习整合到当前的研究方法中,可以发现被忽视的论文,加快识别有前景的研究,并通过预测现实世界的影响和指导转化策略,有可能改变痴呆症研究。
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0.00%
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审稿时长
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