Explainable artificial intelligence for spectroscopy data: a review.

IF 2.9 4区 医学 Q2 PHYSIOLOGY Pflugers Archiv : European journal of physiology Pub Date : 2024-08-01 DOI:10.1007/s00424-024-02997-y
Jhonatan Contreras, Thomas Bocklitz
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Abstract

Explainable artificial intelligence (XAI) has gained significant attention in various domains, including natural and medical image analysis. However, its application in spectroscopy remains relatively unexplored. This systematic review aims to fill this gap by providing a comprehensive overview of the current landscape of XAI in spectroscopy and identifying potential benefits and challenges associated with its implementation. Following the PRISMA guideline 2020, we conducted a systematic search across major journal databases, resulting in 259 initial search results. After removing duplicates and applying inclusion and exclusion criteria, 21 scientific studies were included in this review. Notably, most of the studies focused on using XAI methods for spectral data analysis, emphasizing identifying significant spectral bands rather than specific intensity peaks. Among the most utilized AI techniques were SHapley Additive exPlanations (SHAP), masking methods inspired by Local Interpretable Model-agnostic Explanations (LIME), and Class Activation Mapping (CAM). These methods were favored due to their model-agnostic nature and ease of use, enabling interpretable explanations without modifying the original models. Future research should propose new methods and explore the adaptation of other XAI employed in other domains to better suit the unique characteristics of spectroscopic data.

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光谱数据的可解释人工智能:综述。
可解释人工智能(XAI)在自然和医学图像分析等多个领域都获得了极大关注。然而,其在光谱学中的应用仍相对欠缺。本系统综述旨在通过全面概述 XAI 在光谱学中的应用现状,并确定与实施 XAI 相关的潜在优势和挑战,从而填补这一空白。按照 2020 年 PRISMA 指南,我们在主要期刊数据库中进行了系统检索,得到了 259 项初步检索结果。在去除重复内容并应用纳入和排除标准后,21 项科学研究被纳入本综述。值得注意的是,大多数研究侧重于使用 XAI 方法进行光谱数据分析,强调识别重要的光谱带而不是特定的强度峰。其中使用最多的人工智能技术有 SHapley Additive exPlanations (SHAP)、受本地可解释模型解释 (LIME) 启发的掩蔽方法和类活化映射 (CAM)。这些方法因其与模型无关的性质和易用性而受到青睐,无需修改原始模型即可实现可解释性解释。未来的研究应提出新的方法,并探索如何调整其他领域采用的 XAI,以更好地适应光谱数据的独特性。
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来源期刊
CiteScore
8.80
自引率
2.20%
发文量
121
审稿时长
4-8 weeks
期刊介绍: Pflügers Archiv European Journal of Physiology publishes those results of original research that are seen as advancing the physiological sciences, especially those providing mechanistic insights into physiological functions at the molecular and cellular level, and clearly conveying a physiological message. Submissions are encouraged that deal with the evaluation of molecular and cellular mechanisms of disease, ideally resulting in translational research. Purely descriptive papers covering applied physiology or clinical papers will be excluded. Papers on methodological topics will be considered if they contribute to the development of novel tools for further investigation of (patho)physiological mechanisms.
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