The MCR-ALS Trilinearity Constraint for Data With Missing Values

IF 2.3 4区 化学 Q1 SOCIAL WORK Journal of Chemometrics Pub Date : 2024-08-02 DOI:10.1002/cem.3584
Adrián Gómez-Sánchez, Raffaele Vitale, Pablo Loza-Alvarez, Cyril Ruckebusch, Anna de Juan
{"title":"The MCR-ALS Trilinearity Constraint for Data With Missing Values","authors":"Adrián Gómez-Sánchez,&nbsp;Raffaele Vitale,&nbsp;Pablo Loza-Alvarez,&nbsp;Cyril Ruckebusch,&nbsp;Anna de Juan","doi":"10.1002/cem.3584","DOIUrl":null,"url":null,"abstract":"<p>Trilinearity is a property of some chemical data that leads to unique decompositions when curve resolution or multiway decomposition methods are used. Curve resolution algorithms, such as Multivariate Curve Resolution–Alternating Least Squares (MCR-ALS), can provide trilinear models by implementing the trilinearity condition as a constraint. However, some trilinear analytical measurements, such as excitation–emission matrix (EEM) measurements, usually exhibit systematic patterns of missing data due to the nature of the technique, which imply a challenge to the classical implementation of the trilinearity constraint. In this instance, extrapolation or imputation methodologies may not provide optimal results. Recently, a novel algorithmic strategy to constrain trilinearity in MCR-ALS in the presence of missing data was developed. This strategy relies on the sequential imposition of a classical trilinearity restriction on different submatrices of the original investigated dataset, but, although effective, was found to be particularly slow and requires a proper submatrix selection criterion. In this paper, a much simpler implementation of the trilinearity constraint in MCR-ALS capable of handling systematic patterns of missing data and based on the principles of the Nonlinear Iterative Partial Least Squares (NIPALS) algorithm is proposed. This novel approach preserves the trilinearity of the retrieved component profiles without requiring data imputation or subset selection steps and, as with all other constraints designed for MCR-ALS, offers the flexibility to be applied component-wise or data block-wise, providing hybrid bilinear/trilinear models. Furthermore, it can be easily extended to cope with any trilinear or higher-order dataset with whatever pattern of missing values.</p>","PeriodicalId":15274,"journal":{"name":"Journal of Chemometrics","volume":"38 11","pages":""},"PeriodicalIF":2.3000,"publicationDate":"2024-08-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1002/cem.3584","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of Chemometrics","FirstCategoryId":"92","ListUrlMain":"https://onlinelibrary.wiley.com/doi/10.1002/cem.3584","RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"SOCIAL WORK","Score":null,"Total":0}
引用次数: 0

Abstract

Trilinearity is a property of some chemical data that leads to unique decompositions when curve resolution or multiway decomposition methods are used. Curve resolution algorithms, such as Multivariate Curve Resolution–Alternating Least Squares (MCR-ALS), can provide trilinear models by implementing the trilinearity condition as a constraint. However, some trilinear analytical measurements, such as excitation–emission matrix (EEM) measurements, usually exhibit systematic patterns of missing data due to the nature of the technique, which imply a challenge to the classical implementation of the trilinearity constraint. In this instance, extrapolation or imputation methodologies may not provide optimal results. Recently, a novel algorithmic strategy to constrain trilinearity in MCR-ALS in the presence of missing data was developed. This strategy relies on the sequential imposition of a classical trilinearity restriction on different submatrices of the original investigated dataset, but, although effective, was found to be particularly slow and requires a proper submatrix selection criterion. In this paper, a much simpler implementation of the trilinearity constraint in MCR-ALS capable of handling systematic patterns of missing data and based on the principles of the Nonlinear Iterative Partial Least Squares (NIPALS) algorithm is proposed. This novel approach preserves the trilinearity of the retrieved component profiles without requiring data imputation or subset selection steps and, as with all other constraints designed for MCR-ALS, offers the flexibility to be applied component-wise or data block-wise, providing hybrid bilinear/trilinear models. Furthermore, it can be easily extended to cope with any trilinear or higher-order dataset with whatever pattern of missing values.

Abstract Image

查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
缺失值数据的 MCR-ALS 三线性约束
三线性是某些化学数据的一个特性,在使用曲线解析或多向分解方法时会产生独特的分解。曲线解析算法,如多元曲线解析-替代最小二乘法(MCR-ALS),可以通过将三线性条件作为约束条件来提供三线性模型。然而,一些三线性分析测量,如激发-发射矩阵(EEM)测量,由于其技术性质,通常会出现系统性的数据缺失模式,这对经典的三线性约束条件的实现提出了挑战。在这种情况下,外推法或估算法可能无法提供最佳结果。最近,我们开发了一种新的算法策略,用于在存在缺失数据的情况下对 MCR-ALS 中的三线性进行约束。这种策略依赖于对原始调查数据集的不同子矩阵依次施加经典的三线性限制,但尽管有效,却发现速度特别慢,而且需要适当的子矩阵选择标准。本文根据非线性迭代部分最小二乘法(NIPALS)算法的原理,提出了一种更简单的 MCR-ALS 中三线性约束的实现方法,该方法能够处理系统性缺失数据模式。这种新颖的方法无需数据估算或子集选择步骤,就能保留检索到的成分剖面的三线性,而且与为 MCR-ALS 设计的所有其他约束一样,可以灵活地按成分或数据块应用,提供混合双线性/三线性模型。此外,它还可以很容易地扩展到任何三线性或高阶数据集,以应对任何缺失值模式。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 去求助
来源期刊
Journal of Chemometrics
Journal of Chemometrics 化学-分析化学
CiteScore
5.20
自引率
8.30%
发文量
78
审稿时长
2 months
期刊介绍: The Journal of Chemometrics is devoted to the rapid publication of original scientific papers, reviews and short communications on fundamental and applied aspects of chemometrics. It also provides a forum for the exchange of information on meetings and other news relevant to the growing community of scientists who are interested in chemometrics and its applications. Short, critical review papers are a particularly important feature of the journal, in view of the multidisciplinary readership at which it is aimed.
期刊最新文献
Issue Information Cover Image Past, Present and Future of Research in Analytical Figures of Merit Analytical Figures of Merit in Univariate, Multivariate, and Multiway Calibration: What Have We Learned? What Do We Still Need to Learn? Paul Geladi (1951–2024) Chemometrician, spectroscopist and pioneer
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1