Towards improved biofilm models

IF 69.2 1区 生物学 Q1 MICROBIOLOGY Nature Reviews Microbiology Pub Date : 2024-08-07 DOI:10.1038/s41579-024-01086-2
Kendra P. Rumbaugh, Marvin Whiteley
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Abstract

Biofilms are complex microbial communities that have a critical function in many natural ecosystems, industrial settings as well as in recurrent and chronic infections. Biofilms are highly heterogeneous and dynamic assemblages that display complex responses to varying environmental factors, and those properties present substantial challenges for their study and control. In recent years, there has been a growing interest in developing improved biofilm models to offer more precise and comprehensive representations of these intricate systems. However, an objective assessment for ascertaining the ability of biofilms in model systems to recapitulate those in natural environments has been lacking. In this Perspective, we focus on medical biofilms to delve into the current state-of-the-art in biofilm modelling, emphasizing the advantages and limitations of different approaches and addressing the key challenges and opportunities for future research. We outline a framework for quantitatively assessing model accuracy. Ultimately, this Perspective aims to provide a comprehensive and critical overview of medically focused biofilm models, with the intent of inspiring future research aimed at enhancing the biological relevance of biofilm models.

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改进生物膜模型
生物膜是一种复杂的微生物群落,在许多自然生态系统、工业环境以及复发性和慢性感染中具有重要功能。生物膜是高度异质性和动态的集合体,对不同的环境因素表现出复杂的反应,这些特性给生物膜的研究和控制带来了巨大挑战。近年来,人们对开发改良生物膜模型以更精确、更全面地描述这些复杂系统的兴趣与日俱增。然而,目前还缺乏一种客观的评估方法来确定模型系统中生物膜再现自然环境中生物膜的能力。在本《视角》中,我们以医用生物膜为重点,深入探讨了生物膜建模的最新进展,强调了不同方法的优势和局限性,并探讨了未来研究的主要挑战和机遇。我们概述了定量评估模型准确性的框架。最终,本视角旨在对以医学为重点的生物膜模型进行全面、批判性的概述,以启发未来的研究,提高生物膜模型的生物学相关性。
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来源期刊
Nature Reviews Microbiology
Nature Reviews Microbiology 生物-微生物学
CiteScore
74.00
自引率
0.50%
发文量
149
审稿时长
6-12 weeks
期刊介绍: At Nature Reviews Microbiology, our goal is to become the leading source of reviews and commentaries for the scientific community we cater to. We are dedicated to publishing articles that are not only authoritative but also easily accessible, supplementing them with clear and concise figures, tables, and other visual aids. Our objective is to offer an unparalleled service to authors, referees, and readers, and we continuously strive to maximize the usefulness and impact of each article we publish. With a focus on Reviews, Perspectives, and Comments spanning the entire field of microbiology, our wide scope ensures that the work we feature reaches the widest possible audience.
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