Attention improvement for data-driven analyzing fluorescence excitation-emission matrix spectra via interpretable attention mechanism

IF 10.4 1区 工程技术 Q1 ENGINEERING, CHEMICAL npj Clean Water Pub Date : 2024-08-08 DOI:10.1038/s41545-024-00367-w
Run-Ze Xu, Jia-Shun Cao, Jing-Yang Luo, Bing-Jie Ni, Fang Fang, Weijing Liu, Peifang Wang
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Abstract

Analyzing three-dimensional excitation-emission matrix (3D-EEM) spectra through machine learning models has drawn increasing attention, whereas the reliability of these machine learning models remains unclear due to their “black box” nature. In this study, the convolutional neural network (CNN) for classifying numbers of fluorescent components in 3D-EEM spectra was interpreted by gradient-weighted class activation mapping (Grad-CAM), guided Grad-CAM, and structured attention graphs (SAGs). Results showed that the original CNN classifier with high classification accuracy may make a classification based on misleading attention to the non-fluorescence area in 3D-EEM spectra. By removing Rayleigh scatterings in 3D-EEM spectra and integrating convolutional block attention module (CBAM) in CNN classifiers, the correct attention of the trained CNN classifier with CBAM greatly increased from 17.6% to 57.2%. This work formulated strategies for improving CNN classifiers associated with environmental fields and would provide great help for water determination in both natural and artificial environments.

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通过可解释的注意力机制提高数据驱动分析荧光激发-发射矩阵光谱的注意力
通过机器学习模型分析三维激发-发射矩阵(3D-EEM)光谱已引起越来越多的关注,但由于其 "黑箱 "性质,这些机器学习模型的可靠性仍不明确。本研究通过梯度加权类激活图谱(Grad-CAM)、引导 Grad-CAM 和结构化注意力图谱(SAGs)对卷积神经网络(CNN)进行了解释,以对 3D-EEM 光谱中的荧光成分数量进行分类。结果表明,原始 CNN 分类器的分类准确率很高,但可能会误导对 3D-EEM 光谱中非荧光区域的关注而进行分类。通过去除三维电子显微镜光谱中的瑞利散射,并在 CNN 分类器中集成卷积块注意模块(CBAM),使用 CBAM 训练的 CNN 分类器的正确注意率从 17.6% 大幅提高到 57.2%。这项工作为改进与环境领域相关的 CNN 分类器制定了策略,将为自然和人工环境中的水判定提供巨大帮助。
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来源期刊
npj Clean Water
npj Clean Water Environmental Science-Water Science and Technology
CiteScore
15.30
自引率
2.60%
发文量
61
审稿时长
5 weeks
期刊介绍: npj Clean Water publishes high-quality papers that report cutting-edge science, technology, applications, policies, and societal issues contributing to a more sustainable supply of clean water. The journal's publications may also support and accelerate the achievement of Sustainable Development Goal 6, which focuses on clean water and sanitation.
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