Self-consistent field theory for loop-containing polymers: A general algorithm for path-determination

IF 7.2 2区 物理与天体物理 Q1 COMPUTER SCIENCE, INTERDISCIPLINARY APPLICATIONS Computer Physics Communications Pub Date : 2024-08-02 DOI:10.1016/j.cpc.2024.109330
Takashi Honda , Yoshinori Tomiyoshi , Toshihiro Kawakatsu
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Abstract

An algorithm was developed for self-consistent field theory (SCFT) simulations of loop-containing polymers (LCPs), where the total number of independent loops (fundamental cycles in the polymer structure) is characterized by the “cycle rank.” Although various multi-ring and cage-like polymers have been reported, there is no explicit SCFT scheme for LCPs with multiple loops. An LCP was cut to open its fundamental cycles to form a pseudo-tree-like polymer. Conventional SCFT calculations for pseudo-tree-like polymers require extra spatial constraints on the pseudo-free endpoints generated by opening the fundamental cycle, which increases the computational cost. A reduction in the computational cost was observed, and the algorithm was applied to microphase-separated structures of small LCPs.

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含环聚合物的自洽场理论:路径确定的通用算法
为含环聚合物(LCP)的自洽场理论(SCFT)模拟开发了一种算法,其中独立环(聚合物结构中的基本循环)的总数以 "循环等级 "为特征。虽然已有各种多环和笼状聚合物的报道,但目前还没有明确的 SCFT 方案用于多环 LCP。对 LCP 进行切割,打开其基本循环,形成了一种伪树状聚合物。对伪树状聚合物的传统 SCFT 计算需要对打开基本循环产生的伪自由端点施加额外的空间约束,这增加了计算成本。我们观察到计算成本有所降低,并将该算法应用于小型 LCP 的微相分离结构。
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来源期刊
Computer Physics Communications
Computer Physics Communications 物理-计算机:跨学科应用
CiteScore
12.10
自引率
3.20%
发文量
287
审稿时长
5.3 months
期刊介绍: The focus of CPC is on contemporary computational methods and techniques and their implementation, the effectiveness of which will normally be evidenced by the author(s) within the context of a substantive problem in physics. Within this setting CPC publishes two types of paper. Computer Programs in Physics (CPiP) These papers describe significant computer programs to be archived in the CPC Program Library which is held in the Mendeley Data repository. The submitted software must be covered by an approved open source licence. Papers and associated computer programs that address a problem of contemporary interest in physics that cannot be solved by current software are particularly encouraged. Computational Physics Papers (CP) These are research papers in, but are not limited to, the following themes across computational physics and related disciplines. mathematical and numerical methods and algorithms; computational models including those associated with the design, control and analysis of experiments; and algebraic computation. Each will normally include software implementation and performance details. The software implementation should, ideally, be available via GitHub, Zenodo or an institutional repository.In addition, research papers on the impact of advanced computer architecture and special purpose computers on computing in the physical sciences and software topics related to, and of importance in, the physical sciences may be considered.
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