Prognostic and immune infiltration implications of SIGLEC9 in SKCM.

IF 4.6 Q2 MATERIALS SCIENCE, BIOMATERIALS ACS Applied Bio Materials Pub Date : 2024-08-17 DOI:10.1186/s13000-024-01536-8
Peipei Yang, Yunhui Jiang, Rong Chen, Junhan Yang, Mengting Liu, Xieping Huang, Ganglin Xu, Rui Hao
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Abstract

The occurrence and progression of skin cutaneous melanoma (SKCM) is strongly associated with immune cells infiltrating the tumor microenvironment (TME). This study examined the expression, prognosis, and immune relevance of SIGLEC9 in SKCM using multiple online databases. Analysis of the GEPIA2 and Ualcan databases revealed that SIGLEC9 is highly expressed in SKCM, and patients with high SIGLEC9 expression had improved overall survival (OS). Furthermore, the mutation rate of SIGLEC9 in SKCM patients was found to be 5.41%, the highest observed. The expression of SIGLEC9 was positively correlated with macrophages, neutrophils and B cells, CD8 + T cells, CD4 + T cells, and dendritic cells, according to TIMER. Based on TCGA-SKCM data, we verified that high SIGLEC9 expression is closely associated with a good prognosis for SKCM patients, including overall survival, progression-free interval, and disease-specific survival. This positive prognosis could be due to the infiltration of immune cells into the TME. Additionally, our analysis of single-cell transcriptome data revealed that SIGLEC9 not only played a role in the normal skin immune microenvironment, but is also highly expressed in immune cell subpopulations of SKCM patients, regulating the immune response to tumors. Our findings suggest that the close association between SIGLEC9 and SKCM prognosis is primarily mediated by its effect on the tumor immune microenvironment.

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SIGLEC9 在 SKCM 中的预后和免疫浸润影响。
皮肤黑色素瘤(SKCM)的发生和进展与肿瘤微环境(TME)中浸润的免疫细胞密切相关。本研究利用多个在线数据库研究了SIGLEC9在SKCM中的表达、预后和免疫相关性。对GEPIA2和Ualcan数据库的分析表明,SIGLEC9在SKCM中高表达,SIGLEC9高表达的患者总生存率(OS)有所提高。此外,SKCM 患者中 SIGLEC9 的突变率为 5.41%,是观察到的最高突变率。根据TIMER,SIGLEC9的表达与巨噬细胞、中性粒细胞、B细胞、CD8 + T细胞、CD4 + T细胞和树突状细胞呈正相关。基于TCGA-SKCM数据,我们验证了SIGLEC9的高表达与SKCM患者的良好预后密切相关,包括总生存期、无进展间隔期和疾病特异性生存期。这种良好的预后可能是由于免疫细胞渗入了TME。此外,我们对单细胞转录组数据的分析表明,SIGLEC9 不仅在正常皮肤免疫微环境中发挥作用,而且在 SKCM 患者的免疫细胞亚群中高度表达,从而调节对肿瘤的免疫反应。我们的研究结果表明,SIGLEC9与SKCM预后的密切关系主要是由其对肿瘤免疫微环境的影响介导的。
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来源期刊
ACS Applied Bio Materials
ACS Applied Bio Materials Chemistry-Chemistry (all)
CiteScore
9.40
自引率
2.10%
发文量
464
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