Ubiquitous chromatin opening element enhance Darbepoetin alfa expression in CHO DG44 cell line

IF 3.7 3区 生物学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Biochemical Engineering Journal Pub Date : 2024-08-16 DOI:10.1016/j.bej.2024.109468
Fateme Hasheminejad , Seyede Hoda Jazayeri , Zahra Halfinezhad , Azam Dalman , Abbas Daneshipour , Baharak Abd Emami , Mohsen Gharanfoli , Amir Amiri-Yekta
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Abstract

Despite extensive efforts in biotherapeutics production, there is a pressing need to enhance the biomanufacturing process to meet the growing demand for recombinant products. Ubiquitous Chromatin Opening Element (UCOE), chromatin-modifying elements derived from CpG islands, are crucial in regulating gene expression. Therefore, to explore the UCOE effect on gene expression, we cloned codon-optimized Darbepoetin alfa (DPO) sequence into the pOptiVEC then the Darbepoetin alfa-IRES-DHFR fragment was digested, and cloned into the UCOE vector. Both pOptiVEC-DPO and UCOE-DPO-IRES-DHFR cassettes were linearized and transfected into the two cell pools of CHO DG44 cells. The transfected cells were adapted with CD OptiCHO™ medium after 20 days. Recombinant DPO expression was evaluated by qRT-PCR technique. Qualitative and quantitative protein expression analysis was also carried out by western blotting and ELISA assays. Our findings showed a boosted DPO expression rate at both mRNA and protein levels in the UCOE-DPO-IRES-DHFR pool compared to pOptiVEC-DPO. These data suggest that UCOE and codon optimization result in high and stable gene expression in the CHO DG44 cell line.

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普遍存在的染色质开放元件可增强 Darbepoetin alfa 在 CHO DG44 细胞系中的表达
尽管在生物治疗药物生产方面做出了大量努力,但仍迫切需要改进生物制造工艺,以满足对重组产品日益增长的需求。无处不在的染色质开放位点(Ubiquitous Chromatin Opening Element,UCOE)是源于CpG岛的染色质修饰元件,在调控基因表达方面起着至关重要的作用。因此,为了探索 UCOE 对基因表达的影响,我们将经过密码子优化的 Darbepoetin alfa(DPO)序列克隆到 pOptiVEC 中,然后将 Darbepoetin alfa-IRES-DHFR 片段消化并克隆到 UCOE 载体中。将 pOptiVEC-DPO 和 UCOE-DPO-IRES-DHFR 盒线性化并转染到 CHO DG44 细胞的两个细胞池中。转染细胞在 20 天后适应 CD OptiCHO™ 培养基。用 qRT-PCR 技术评估重组 DPO 的表达。此外,还通过 Western 印迹法和 ELISA 检测法对蛋白质表达进行了定性和定量分析。我们的研究结果表明,与 pOptiVEC-DPO 相比,UCOE-DPO-IRES-DHFR 池在 mRNA 和蛋白质水平上都提高了 DPO 的表达率。这些数据表明,UCOE 和密码子优化能在 CHO DG44 细胞系中实现高水平的稳定基因表达。
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来源期刊
Biochemical Engineering Journal
Biochemical Engineering Journal 工程技术-工程:化工
CiteScore
7.10
自引率
5.10%
发文量
380
审稿时长
34 days
期刊介绍: The Biochemical Engineering Journal aims to promote progress in the crucial chemical engineering aspects of the development of biological processes associated with everything from raw materials preparation to product recovery relevant to industries as diverse as medical/healthcare, industrial biotechnology, and environmental biotechnology. The Journal welcomes full length original research papers, short communications, and review papers* in the following research fields: Biocatalysis (enzyme or microbial) and biotransformations, including immobilized biocatalyst preparation and kinetics Biosensors and Biodevices including biofabrication and novel fuel cell development Bioseparations including scale-up and protein refolding/renaturation Environmental Bioengineering including bioconversion, bioremediation, and microbial fuel cells Bioreactor Systems including characterization, optimization and scale-up Bioresources and Biorefinery Engineering including biomass conversion, biofuels, bioenergy, and optimization Industrial Biotechnology including specialty chemicals, platform chemicals and neutraceuticals Biomaterials and Tissue Engineering including bioartificial organs, cell encapsulation, and controlled release Cell Culture Engineering (plant, animal or insect cells) including viral vectors, monoclonal antibodies, recombinant proteins, vaccines, and secondary metabolites Cell Therapies and Stem Cells including pluripotent, mesenchymal and hematopoietic stem cells; immunotherapies; tissue-specific differentiation; and cryopreservation Metabolic Engineering, Systems and Synthetic Biology including OMICS, bioinformatics, in silico biology, and metabolic flux analysis Protein Engineering including enzyme engineering and directed evolution.
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