Model development using hybrid method for prediction of drug release from biomaterial matrix

IF 3.7 2区 化学 Q2 AUTOMATION & CONTROL SYSTEMS Chemometrics and Intelligent Laboratory Systems Pub Date : 2024-08-22 DOI:10.1016/j.chemolab.2024.105216
Mohammed Alqarni , Shaimaa Mohammed Al Harthi , Mohammed Abdullah Alzubaidi , Ali Abdullah Alqarni , Bandar Saud Shukr , Hassan Talat Shawli
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Abstract

A comprehensive multi-scale computational strategy was developed in this study based on mass transfer and machine learning for simulation of drug concentration distribution in a biomaterial matrix. The controlled release was modeled and validated via the hybrid model. Mass transfer equations along with kinetics models were solved numerically and the results were then used for machine learning models. We investigated the performance of three regression models, namely Decision Tree (DT), Random Forest (RF), and Extra Tree (ET) in predicting medicine concentration (C) based on r and z data. Hyper-parameter optimization is conducted using Glowworm Swarm Optimization (GSO). Results revealed high predictive accuracy across all models, with ET demonstrating superior performance, achieving a coefficient of determination value (R2) of 0.99854, an RMSE of 1.1446E-05, and a maximum error of 6.49087E-05. DT and RF also exhibit notable performance, with coefficients of determination equal to 0.99571 and 0.99655, respectively. These results highlight the effectiveness of ensemble tree-based methods in accurately predicting chemical concentrations, with Extra Tree (ET) Regression emerging as the most promising model for this specific dataset.

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利用混合法开发模型,预测生物材料基质中的药物释放量
本研究开发了一种基于传质和机器学习的多尺度综合计算策略,用于模拟生物材料基质中的药物浓度分布。通过混合模型对控释进行了建模和验证。对传质方程和动力学模型进行了数值求解,然后将结果用于机器学习模型。我们研究了三种回归模型,即决策树(DT)、随机森林(RF)和额外树(ET)在基于 r 和 z 数据预测药物浓度(C)方面的性能。使用萤火虫群优化(GSO)对超参数进行了优化。结果表明,所有模型的预测准确率都很高,其中 ET 表现优异,其决定系数 (R2) 为 0.99854,均方根误差为 1.1446E-05,最大误差为 6.49087E-05。DT 和 RF 也表现不俗,它们的判定系数分别为 0.99571 和 0.99655。这些结果凸显了基于集合树的方法在准确预测化学物质浓度方面的有效性,其中额外树(ET)回归是该特定数据集最有前途的模型。
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来源期刊
CiteScore
7.50
自引率
7.70%
发文量
169
审稿时长
3.4 months
期刊介绍: Chemometrics and Intelligent Laboratory Systems publishes original research papers, short communications, reviews, tutorials and Original Software Publications reporting on development of novel statistical, mathematical, or computer techniques in Chemistry and related disciplines. Chemometrics is the chemical discipline that uses mathematical and statistical methods to design or select optimal procedures and experiments, and to provide maximum chemical information by analysing chemical data. The journal deals with the following topics: 1) Development of new statistical, mathematical and chemometrical methods for Chemistry and related fields (Environmental Chemistry, Biochemistry, Toxicology, System Biology, -Omics, etc.) 2) Novel applications of chemometrics to all branches of Chemistry and related fields (typical domains of interest are: process data analysis, experimental design, data mining, signal processing, supervised modelling, decision making, robust statistics, mixture analysis, multivariate calibration etc.) Routine applications of established chemometrical techniques will not be considered. 3) Development of new software that provides novel tools or truly advances the use of chemometrical methods. 4) Well characterized data sets to test performance for the new methods and software. The journal complies with International Committee of Medical Journal Editors'' Uniform requirements for manuscripts.
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