Mohammed Alqarni , Shaimaa Mohammed Al Harthi , Mohammed Abdullah Alzubaidi , Ali Abdullah Alqarni , Bandar Saud Shukr , Hassan Talat Shawli
{"title":"Model development using hybrid method for prediction of drug release from biomaterial matrix","authors":"Mohammed Alqarni , Shaimaa Mohammed Al Harthi , Mohammed Abdullah Alzubaidi , Ali Abdullah Alqarni , Bandar Saud Shukr , Hassan Talat Shawli","doi":"10.1016/j.chemolab.2024.105216","DOIUrl":null,"url":null,"abstract":"<div><p>A comprehensive multi-scale computational strategy was developed in this study based on mass transfer and machine learning for simulation of drug concentration distribution in a biomaterial matrix. The controlled release was modeled and validated via the hybrid model. Mass transfer equations along with kinetics models were solved numerically and the results were then used for machine learning models. We investigated the performance of three regression models, namely Decision Tree (DT), Random Forest (RF), and Extra Tree (ET) in predicting medicine concentration (C) based on r and z data. Hyper-parameter optimization is conducted using Glowworm Swarm Optimization (GSO). Results revealed high predictive accuracy across all models, with ET demonstrating superior performance, achieving a coefficient of determination value (R<sup>2</sup>) of 0.99854, an RMSE of 1.1446E-05, and a maximum error of 6.49087E-05. DT and RF also exhibit notable performance, with coefficients of determination equal to 0.99571 and 0.99655, respectively. These results highlight the effectiveness of ensemble tree-based methods in accurately predicting chemical concentrations, with Extra Tree (ET) Regression emerging as the most promising model for this specific dataset.</p></div>","PeriodicalId":9774,"journal":{"name":"Chemometrics and Intelligent Laboratory Systems","volume":"253 ","pages":"Article 105216"},"PeriodicalIF":3.7000,"publicationDate":"2024-08-22","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Chemometrics and Intelligent Laboratory Systems","FirstCategoryId":"94","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S0169743924001564","RegionNum":2,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"AUTOMATION & CONTROL SYSTEMS","Score":null,"Total":0}
引用次数: 0
Abstract
A comprehensive multi-scale computational strategy was developed in this study based on mass transfer and machine learning for simulation of drug concentration distribution in a biomaterial matrix. The controlled release was modeled and validated via the hybrid model. Mass transfer equations along with kinetics models were solved numerically and the results were then used for machine learning models. We investigated the performance of three regression models, namely Decision Tree (DT), Random Forest (RF), and Extra Tree (ET) in predicting medicine concentration (C) based on r and z data. Hyper-parameter optimization is conducted using Glowworm Swarm Optimization (GSO). Results revealed high predictive accuracy across all models, with ET demonstrating superior performance, achieving a coefficient of determination value (R2) of 0.99854, an RMSE of 1.1446E-05, and a maximum error of 6.49087E-05. DT and RF also exhibit notable performance, with coefficients of determination equal to 0.99571 and 0.99655, respectively. These results highlight the effectiveness of ensemble tree-based methods in accurately predicting chemical concentrations, with Extra Tree (ET) Regression emerging as the most promising model for this specific dataset.
期刊介绍:
Chemometrics and Intelligent Laboratory Systems publishes original research papers, short communications, reviews, tutorials and Original Software Publications reporting on development of novel statistical, mathematical, or computer techniques in Chemistry and related disciplines.
Chemometrics is the chemical discipline that uses mathematical and statistical methods to design or select optimal procedures and experiments, and to provide maximum chemical information by analysing chemical data.
The journal deals with the following topics:
1) Development of new statistical, mathematical and chemometrical methods for Chemistry and related fields (Environmental Chemistry, Biochemistry, Toxicology, System Biology, -Omics, etc.)
2) Novel applications of chemometrics to all branches of Chemistry and related fields (typical domains of interest are: process data analysis, experimental design, data mining, signal processing, supervised modelling, decision making, robust statistics, mixture analysis, multivariate calibration etc.) Routine applications of established chemometrical techniques will not be considered.
3) Development of new software that provides novel tools or truly advances the use of chemometrical methods.
4) Well characterized data sets to test performance for the new methods and software.
The journal complies with International Committee of Medical Journal Editors'' Uniform requirements for manuscripts.