Evaluating the performance of models predicting the flowering times of twenty-six apple cultivars in England

IF 4.5 1区 农林科学 Q1 AGRONOMY European Journal of Agronomy Pub Date : 2024-08-27 DOI:10.1016/j.eja.2024.127319
Haidee Tang , Xiaojun Zhai , Xiangming Xu
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Abstract

The timing of the transition between endodormancy and ecodormancy remains uncertain. However, with advancements in phenology modelling, we can now fit models which allow for variable transitions between chilling and forcing models. Previous studies have primarily focused on single-cultivar parameterisation, and few have explored multi-cultivar comparative modelling. In this paper, we address this gap by evaluating three parameterisation approaches based on the recently developed PhenoFlex framework using a large flowering time dataset of twenty-six apple cultivars collected at the same location in England. The three parameterisation approaches were: cultivar-specific, group-specific with the groups derived using the K-means algorithm on mean bloom and variation of bloom dates, and a common model (for all twenty-six cultivars). The three PhenoFlex models fitted to each of three groups of cultivars based on their flowering time and the common model fitted to all cultivars achieved similar predictive performance, better than predictions using the average bloom date of each cultivar. The best approach to apply would depend on the amount of data present. The common model works best with large number of cultivars with small datasets (∼10 years), the mean flowering date grouped works best with medium numbers of datasets (∼20 years) and the cultivar-specific model should only be used when each cultivar has at least 30 years of data, however, it is more biased, so it is likely to predict bloom dates later than the observed bloom dates. Finally, the PhenoFlex model was shown to perform better than the StepChill model, where no overlapping is allowed between chilling and heat models. The result of this study indicates that the PhenoFlex model can be used to determine apple flowering time at the species level.

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评估英国 26 个苹果栽培品种开花时间预测模型的性能
内蛰期和生态蛰期之间的过渡时间仍不确定。不过,随着物候学建模技术的进步,我们现在可以拟合出允许在寒冷模型和强迫模型之间进行可变过渡的模型。以往的研究主要集中在单品种参数化,很少有研究探讨多品种比较建模。在本文中,我们利用在英格兰同一地点收集的 26 个苹果栽培品种的大型花期数据集,评估了基于最近开发的 PhenoFlex 框架的三种参数化方法,从而弥补了这一空白。这三种参数化方法分别是:针对特定栽培品种的参数化方法、利用平均花期和花期变化的 K-means 算法得出的针对特定组别的参数化方法,以及一个通用模型(适用于所有 26 个栽培品种)。三个 PhenoFlex 模型分别适用于基于开花时间的三组栽培品种,而通用模型则适用于所有栽培品种,两者的预测效果相似,都优于使用各栽培品种平均开花日期的预测效果。最佳应用方法取决于数据量。对于数据集较小的大量栽培品种(10 年以内),普通模型效果最佳;对于数据集中等的栽培品种(20 年以内),平均花期分组模型效果最佳;而只有当每个栽培品种至少有 30 年的数据时,才能使用栽培品种特定模型。最后,PhenoFlex 模型的表现优于 StepChill 模型,在 StepChill 模型中,冷冻和加热模型之间不允许重叠。这项研究的结果表明,PhenoFlex 模型可用于在物种水平上确定苹果的开花时间。
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来源期刊
European Journal of Agronomy
European Journal of Agronomy 农林科学-农艺学
CiteScore
8.30
自引率
7.70%
发文量
187
审稿时长
4.5 months
期刊介绍: The European Journal of Agronomy, the official journal of the European Society for Agronomy, publishes original research papers reporting experimental and theoretical contributions to field-based agronomy and crop science. The journal will consider research at the field level for agricultural, horticultural and tree crops, that uses comprehensive and explanatory approaches. The EJA covers the following topics: crop physiology crop production and management including irrigation, fertilization and soil management agroclimatology and modelling plant-soil relationships crop quality and post-harvest physiology farming and cropping systems agroecosystems and the environment crop-weed interactions and management organic farming horticultural crops papers from the European Society for Agronomy bi-annual meetings In determining the suitability of submitted articles for publication, particular scrutiny is placed on the degree of novelty and significance of the research and the extent to which it adds to existing knowledge in agronomy.
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