K Raymond, K E Sobkowich, J D Phillips, L Nguyen, I Mckechnie, R N Mohideen, W Fitzjohn, M Szurkowski, J Davidson, J Rushton, D A Stacey, T M Bernardo
{"title":"Global Burden of Animal Diseases informatics strategy, data quality and model interoperability.","authors":"K Raymond, K E Sobkowich, J D Phillips, L Nguyen, I Mckechnie, R N Mohideen, W Fitzjohn, M Szurkowski, J Davidson, J Rushton, D A Stacey, T M Bernardo","doi":"10.20506/rst.43.3522","DOIUrl":null,"url":null,"abstract":"<p><p>The estimation of the global burden of animal diseases requires the integration of multidisciplinary models: economic, statistical, mathematical and conceptual. The output of one model often serves as input for another; therefore, consistency of the model components is critical. The Global Burden of Animal Diseases (GBADs) Informatics team aims to strengthen the scientific foundations of modelling by creating tools that address challenges related to reproducibility, as well as model, data and metadata interoperability. Aligning with these aims, several tools are under development: a) GBADs'Trusted Animal Information Portal (TAIL) is a data acquisition platform that enhances the discoverability of data and literature and improves the user experience of acquiring data. TAIL leverages advanced semantic enrichment techniques (natural language processing and ontologies) and graph databases to provide users with a comprehensive repository of livestock data and literature resources. b) The interoperability of GBADs'models is being improved through the development of an R-based modelling package and standardisation of parameter formats. This initiative aims to foster reproducibility, facilitate data sharing and enable seamless collaboration among stakeholders. c) The GBADs Knowledge Engine is being built to foster an inclusive and dynamic user community by offering data in multiple formats and providing user-friendly mechanisms to garner feedback from the community. These initiatives are critical in addressing complex challenges in animal health and underscore the importance of combining scientific rigour with user-friendly interfaces to empower global efforts in safeguarding animal populations and public health.</p>","PeriodicalId":49596,"journal":{"name":"Revue Scientifique et Technique-Office International Des Epizooties","volume":"43 ","pages":"96-107"},"PeriodicalIF":1.9000,"publicationDate":"2024-08-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Revue Scientifique et Technique-Office International Des Epizooties","FirstCategoryId":"97","ListUrlMain":"https://doi.org/10.20506/rst.43.3522","RegionNum":4,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"VETERINARY SCIENCES","Score":null,"Total":0}
引用次数: 0
Abstract
The estimation of the global burden of animal diseases requires the integration of multidisciplinary models: economic, statistical, mathematical and conceptual. The output of one model often serves as input for another; therefore, consistency of the model components is critical. The Global Burden of Animal Diseases (GBADs) Informatics team aims to strengthen the scientific foundations of modelling by creating tools that address challenges related to reproducibility, as well as model, data and metadata interoperability. Aligning with these aims, several tools are under development: a) GBADs'Trusted Animal Information Portal (TAIL) is a data acquisition platform that enhances the discoverability of data and literature and improves the user experience of acquiring data. TAIL leverages advanced semantic enrichment techniques (natural language processing and ontologies) and graph databases to provide users with a comprehensive repository of livestock data and literature resources. b) The interoperability of GBADs'models is being improved through the development of an R-based modelling package and standardisation of parameter formats. This initiative aims to foster reproducibility, facilitate data sharing and enable seamless collaboration among stakeholders. c) The GBADs Knowledge Engine is being built to foster an inclusive and dynamic user community by offering data in multiple formats and providing user-friendly mechanisms to garner feedback from the community. These initiatives are critical in addressing complex challenges in animal health and underscore the importance of combining scientific rigour with user-friendly interfaces to empower global efforts in safeguarding animal populations and public health.
期刊介绍:
The Scientific and Technical Review is a periodical publication containing scientific information that is updated constantly. The Review plays a significant role in fulfilling some of the priority functions of the OIE. This peer-reviewed journal contains in-depth studies devoted to current scientific and technical developments in animal health and veterinary public health worldwide, food safety and animal welfare. The Review benefits from the advice of an Advisory Editorial Board and a Scientific and Technical Committee composed of top scientists from across the globe.