A compartmental model for the dynamic simulation of pandemics with a multi-phase vaccination and its application to Italian COVID-19 data

IF 4.4 2区 数学 Q1 COMPUTER SCIENCE, INTERDISCIPLINARY APPLICATIONS Mathematics and Computers in Simulation Pub Date : 2024-08-22 DOI:10.1016/j.matcom.2024.08.011
Roy Cerqueti , Alessandro Ramponi , Sergio Scarlatti
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Abstract

We introduce a generalization of the 4 compartments SVIR epidemic model discussed in [1] for the first time. Our model has K+4 compartments. K-1 of these compartments represent additional subsequent vaccination stages not considered in the original SVIR model, while a further compartment accounts for dead people. We analyze the equilibrium points of the model. A time-varying parameters version of it, having K=3 vaccination compartments, is then calibrated to Italian COVID-19 dataset. This analysis is carried out for three specific sub-periods: the first one, ranging from February 24th, 2020, up to December 26th 2020, when no vaccines were available; the second one, from the December 27th, 2020 up to December 31st, 2021, during which the Delta variant of the virus prevailed and Delta-targeted vaccination doses were administered to the population for the first time; finally, the last considered period is ranging from January 10th, 2022 up to June 3rd, 2022, and it was characterized by the diffusion of the Omicron variant. To tackle the problem of undetected infected or undetected recovered people we adopt an approach relying on different scenarios. The calibration of the model uses the property that the discrete-time version of it turns out to be explicitly solvable with respect to the parameters, hence providing a daily estimate of the involved parameters. This produces meaningful evolution patterns of the COVID-19 epidemic which allow a better understanding of the diffusive behavior of the pandemic along time. Lastly a statistical analysis of the epidemiological parameters estimators supports the non stationarity of their time series.

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多阶段疫苗接种大流行动态模拟分区模型及其在意大利 COVID-19 数据中的应用
我们首次引入了 [1] 中讨论的 4 区 SVIR 流行病模型的一般化。我们的模型有 K+4 个分区。其中 K-1 个分区代表原始 SVIR 模型中未考虑的额外后续接种阶段,而另一个分区则代表死亡人数。我们分析了模型的平衡点。然后,我们根据意大利 COVID-19 数据集校准了 K=3 个接种区间的时变参数版本。该分析针对三个特定的子时期进行:第一个时期从 2020 年 2 月 24 日到 2020 年 12 月 26 日,在此期间没有疫苗可用;第二个时期从 2020 年 12 月 27 日到 2021 年 12 月 31 日,在此期间病毒的 Delta 变种盛行,首次向人群接种了 Delta 疫苗;最后一个时期从 2022 年 1 月 10 日到 2022 年 6 月 3 日,其特点是 Omicron 变种的扩散。为了解决未检测到感染者或未检测到康复者的问题,我们采用了一种基于不同情景的方法。该模型的校准使用了离散时间版本的特性,即该模型在参数方面是显式可解的,从而提供了相关参数的每日估计值。这就产生了 COVID-19 流行病有意义的演变模式,从而可以更好地理解该流行病随时间的扩散行为。最后,对流行病学参数估计值的统计分析支持了其时间序列的非静态性。
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来源期刊
Mathematics and Computers in Simulation
Mathematics and Computers in Simulation 数学-计算机:跨学科应用
CiteScore
8.90
自引率
4.30%
发文量
335
审稿时长
54 days
期刊介绍: The aim of the journal is to provide an international forum for the dissemination of up-to-date information in the fields of the mathematics and computers, in particular (but not exclusively) as they apply to the dynamics of systems, their simulation and scientific computation in general. Published material ranges from short, concise research papers to more general tutorial articles. Mathematics and Computers in Simulation, published monthly, is the official organ of IMACS, the International Association for Mathematics and Computers in Simulation (Formerly AICA). This Association, founded in 1955 and legally incorporated in 1956 is a member of FIACC (the Five International Associations Coordinating Committee), together with IFIP, IFAV, IFORS and IMEKO. Topics covered by the journal include mathematical tools in: •The foundations of systems modelling •Numerical analysis and the development of algorithms for simulation They also include considerations about computer hardware for simulation and about special software and compilers. The journal also publishes articles concerned with specific applications of modelling and simulation in science and engineering, with relevant applied mathematics, the general philosophy of systems simulation, and their impact on disciplinary and interdisciplinary research. The journal includes a Book Review section -- and a "News on IMACS" section that contains a Calendar of future Conferences/Events and other information about the Association.
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